[←][→] ath   AT1G56290 Gene
functional annotation
Function   CwfJ-like family protein  
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IBA  
GO CC
GO:0071014 [list] [network] post-mRNA release spliceosomal complex  (12 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_564716.1 
BLAST NP_564716.1 
Orthologous [Ortholog page] LOC4334057 (osa)  LOC25485437 (mtr)  LOC100264750 (vvi)  LOC100384369 (zma)  LOC100785592 (gma)  LOC100805594 (gma)  LOC101246663 (sly)  LOC103838700 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_564716.1)
Subcellular
localization
TargetP
other 9  (predict for NP_564716.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with AT1G56290 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.7 AT3G49601 pre-mRNA-splicing factor [detail] 6241216
8.7 DOT2 SART-1 family [detail] 831541
8.4 AT5G53440 LOW protein: zinc finger CCCH domain protein [detail] 835425
Coexpressed
gene list		 [Coexpressed gene list for AT1G56290]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256227_at
256227_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256227_at
256227_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256227_at
256227_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842082      
Refseq ID (protein) NP_564716.1 


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