[][] ath   AT1G56340 Gene
functional annotation
Function   calreticulin 1a
GO BP
GO:0055074 [list] [network] calcium ion homeostasis  (53 genes)  IGI  
GO:0034976 [list] [network] response to endoplasmic reticulum stress  (83 genes)  IPI  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0006979 [list] [network] response to oxidative stress  (442 genes)  IDA  
GO CC
GO:0005788 [list] [network] endoplasmic reticulum lumen  (39 genes)  IEA  
GO:0099503 [list] [network] secretory vesicle  (169 genes)  HDA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  RCA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0051082 [list] [network] unfolded protein binding  (125 genes)  IEA  
GO:0030246 [list] [network] carbohydrate binding  (303 genes)  IEA  
KEGG ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
ath04145 [list] [network] Phagosome (82 genes)
Protein NP_001031199.1  NP_176030.1 
BLAST NP_001031199.1  NP_176030.1 
Orthologous [Ortholog page] LOC542732 (zma)CRT1b (ath)LOC4334675 (osa)LOC4342826 (osa)LOC7478905 (ppo)LOC11416675 (mtr)LOC100037475 (gma)LOC100256319 (vvi)LOC100264203 (vvi)LOC100811997 (gma)LOC101246093 (sly)LOC103647314 (zma)LOC103836348 (bra)LOC103838690 (bra)LOC103847648 (bra)LOC103871649 (bra)
Subcellular
localization
wolf
vacu 4,  extr 2,  E.R. 1,  golg 1,  chlo 1,  cyto 1,  golg_plas 1,  E.R._plas 1  (predict for NP_001031199.1)
E.R. 5,  extr 2,  golg 1,  chlo 1,  vacu 1,  golg_plas 1  (predict for NP_176030.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001031199.1)
scret 9  (predict for NP_176030.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 17
ath04145 Phagosome 6
ath03060 Protein export 4
Genes directly connected with CRT1a on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
21.4 CNX1 calnexin 1 [detail] 836301
20.2 CRT1b calreticulin 1b [detail] 837441
19.7 SHD Chaperone protein htpG family protein [detail] 828520
17.1 UNE5 thioredoxin family protein [detail] 819360
13.2 AT5G07340 Calreticulin family protein [detail] 830625
9.3 AT1G42480 TLR4 regulator/MIR-interacting MSAP protein [detail] 840852
Coexpressed
gene list
[Coexpressed gene list for CRT1a]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256216_at
256216_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256216_at
256216_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
256216_at
256216_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 842087    
Refseq ID (protein) NP_001031199.1 
NP_176030.1 


The preparation time of this page was 0.3 [sec].