[←][→] ath   AT1G56690 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein  
GO BP
GO:0009451 [list] [network] RNA modification  (403 genes)  IBA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IEA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG
Protein NP_176062.1 
BLAST NP_176062.1 
Orthologous [Ortholog page] LOC7478882 (ppo)  LOC9272128 (osa)  LOC11432085 (mtr)  LOC100244365 (vvi)  LOC100809239 (gma)  LOC103634583 (zma)  LOC103838675 (bra)  LOC104648069 (sly) 
Subcellular
localization
wolf
chlo 4,  mito 3,  nucl 1,  cyto 1,  plas 1,  golg 1,  cyto_nucl 1,  nucl_plas 1,  golg_plas 1,  cyto_plas 1  (predict for NP_176062.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_176062.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G56690 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
15.2 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein [detail] 835362
11.5 AT4G02750 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 828187
11.2 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein [detail] 829871
10.4 AT1G20230 Pentatricopeptide repeat (PPR) superfamily protein [detail] 838612
10.4 AT1G09190 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837439
9.9 AT5G56310 Pentatricopeptide repeat (PPR) superfamily protein [detail] 835730
9.8 AT3G25970 Pentatricopeptide repeat (PPR) superfamily protein [detail] 822194
9.7 AT4G14050 Pentatricopeptide repeat (PPR) superfamily protein [detail] 827041
8.6 AT2G32630 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 817823
Coexpressed
gene list		 [Coexpressed gene list for AT1G56690]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245673_at
245673_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245673_at
245673_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245673_at
245673_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842125      
Refseq ID (protein) NP_176062.1 


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