[][] ath   At1g56690 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
KEGG
Protein NP_176062.1 
BLAST NP_176062.1 
Orthologous [Ortholog page] AT1G09410 (ath)LOC7478882 (ppo)LOC9272128 (osa)LOC11432085 (mtr)LOC18098501 (ppo)LOC100809239 (gma)LOC103838675 (bra)LOC104648069 (sly)LOC123085709 (tae)LOC123092297 (tae)LOC123097638 (tae)LOC123448785 (hvu)
Subcellular
localization
wolf
chlo 4,  mito 3,  nucl 1,  cyto 1,  plas 1,  golg 1,  cyto_nucl 1,  nucl_plas 1,  golg_plas 1,  cyto_plas 1  (predict for NP_176062.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_176062.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G56690 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
15.3 AT5G52850 Pentatricopeptide repeat (PPR) superfamily protein [detail] 835362
12.8 AT4G02750 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 828187
12.4 AT5G39350 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 833931
12.0 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein [detail] 829871
11.0 AT2G27610 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 817307
10.7 AT1G20230 Pentatricopeptide repeat (PPR) superfamily protein [detail] 838612
10.2 AT3G25970 Pentatricopeptide repeat (PPR) superfamily protein [detail] 822194
10.2 AT4G14050 Pentatricopeptide repeat (PPR) superfamily protein [detail] 827041
9.5 AT2G17140 Pentatricopeptide repeat (PPR) superfamily protein [detail] 816219
9.4 AT2G32630 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 817823
8.4 AT5G28460 Pentatricopeptide repeat (PPR) superfamily protein [detail] 832933
8.0 AT3G61520 Pentatricopeptide repeat (PPR) superfamily protein [detail] 825325
Coexpressed
gene list
[Coexpressed gene list for AT1G56690]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245673_at
245673_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245673_at
245673_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
245673_at
245673_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 842125    
Refseq ID (protein) NP_176062.1 


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