ATTED-II : GeneID search result

[←][→] ath At1g56710 Gene

functional annotation

Function

Pectin lyase-like superfamily protein

GO BP

GO:0019748 [list] [network] secondary metabolic process	(766 genes)	IEA
GO:0005975 [list] [network] carbohydrate metabolic process	(844 genes)	IEA
GO:0048364 [list] [network] root development	(1192 genes)	IEA

GO CC

GO:0005576 [list] [network] extracellular region

(3154 genes)

ISM

GO MF

GO:0004650 [list] [network] polygalacturonase activity

(68 genes)

IEA

KEGG

Protein

NP_176064.1

BLAST

NP_176064.1

Orthologous

[Ortholog page] PG7 (gma) AT4G01890 (ath) AT1G02460 (ath) AT1G48100 (ath) LOC4326721 (osa) LOC4326983 (osa) LOC4338287 (osa) LOC7455403 (ppo) LOC7460486 (ppo) LOC7465225 (ppo) LOC7466847 (ppo) LOC7498233 (ppo) LOC11410191 (mtr) LOC11412440 (mtr) LOC11435306 (mtr) LOC18102624 (ppo) LOC25493429 (mtr) LOC100776338 (gma) LOC100778836 (gma) LOC100785528 (gma) LOC100792135 (gma) LOC100792285 (gma) LOC100797770 (gma) LOC100809979 (gma) LOC100820085 (gma) LOC101259291 (sly) LOC101261316 (sly) LOC101266864 (sly) LOC103838677 (bra) LOC103843750 (bra) LOC103844581 (bra) LOC103858798 (bra) LOC103871496 (bra) LOC123060823 (tae) LOC123137922 (tae) LOC123147712 (tae) LOC123160906 (tae) LOC123168859 (tae) LOC123182459 (tae) LOC123410081 (hvu) LOC123413542 (hvu)

Subcellular
localization
wolf

extr 4, chlo 4, cyto 1, mito 1, golg 1

(predict for NP_176064.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_176064.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for AT1G56710]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

245672_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

245672_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

245672_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	842127
Refseq ID (protein)	NP_176064.1

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