[←][→] ath   At1g57560 Gene
functional annotation
Function   myb domain protein 50    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0046283 [list] [network] anthocyanin-containing compound metabolic process  (41 genes)  IEA  
GO:0010941 [list] [network] regulation of cell death  (103 genes)  IEA  
GO:0046148 [list] [network] pigment biosynthetic process  (155 genes)  IEA  
GO:0009753 [list] [network] response to jasmonic acid  (611 genes)  IEA  
GO:0090558 [list] [network] plant epidermis development  (635 genes)  IEA  
GO:0010015 [list] [network] root morphogenesis  (669 genes)  IEA  
GO:0009611 [list] [network] response to wounding  (816 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO:0009620 [list] [network] response to fungus  (999 genes)  IEA  
GO:0048589 [list] [network] developmental growth  (1060 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IEA  
GO:0009888 [list] [network] tissue development  (1806 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
KEGG
Protein NP_001323229.1  NP_176068.1 
BLAST NP_001323229.1  NP_176068.1 
Orthologous [Ortholog page] LOC778072 (gma)  LOC778182 (gma)  MYB55 (ath)  MYB61 (ath)  LOC4327914 (osa)  LOC4337756 (osa)  LOC7455384 (ppo)  LOC7478831 (ppo)  LOC7478868 (ppo)  LOC11409551 (mtr)  LOC11423423 (mtr)  LOC11432542 (mtr)  LOC18098444 (ppo)  LOC25484733 (mtr)  MYB64 (gma)  LOC100782199 (gma)  LOC100788976 (gma)  LOC100790184 (gma)  LOC100815881 (gma)  LOC100819449 (gma)  LOC101249128 (sly)  LOC101268231 (sly)  LOC103836328 (bra)  LOC103836804 (bra)  LOC103843348 (bra)  LOC103871726 (bra)  LOC123110998 (tae)  LOC123180363 (tae)  LOC123190562 (tae)  LOC123424245 (hvu) 
Subcellular
localization
wolf
nucl 9,  mito 1,  plas 1,  mito_plas 1  (predict for NP_001323229.1)
nucl 8,  plas 1,  golg_plas 1  (predict for NP_176068.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_001323229.1)
other 8,  mito 3  (predict for NP_176068.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00380 Tryptophan metabolism 2
ath00966 Glucosinolate biosynthesis 2
ath01210 2-Oxocarboxylic acid metabolism 2
ath00908 Zeatin biosynthesis 2
Genes directly connected with MYB50 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.5 GPK1 glyoxysomal protein kinase 1 [detail] 821006
5.4 EDS5 MATE efflux family protein [detail] 830058
4.6 NUDT5 nudix hydrolase homolog 5 [detail] 814983
4.0 CKX3 cytokinin oxidase 3 [detail] 835799
Coexpressed
gene list		 [Coexpressed gene list for MYB50]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246401_at
246401_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246401_at
246401_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246401_at
246401_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842131      
Refseq ID (protein) NP_001323229.1 
NP_176068.1 


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