[←][→] ath   AT1G58470 Gene
functional annotation
Function   RNA-binding protein 1  
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003727 [list] [network] single-stranded RNA binding  (64 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IPI  
KEGG ath03015 [list] [network] mRNA surveillance pathway (115 genes)
Protein NP_001320402.1  NP_176143.1 
BLAST NP_001320402.1  NP_176143.1 
Orthologous [Ortholog page] LOC7472638 (ppo)  LOC7488853 (ppo)  LOC25489991 (mtr)  LOC100255821 (vvi)  LOC100786665 (gma)  LOC100816822 (gma)  LOC101254896 (sly)  LOC103838609 (bra) 
Subcellular
localization
wolf
chlo 4,  pero 4,  nucl 1,  mito 1  (predict for NP_001320402.1)
chlo 4,  pero 4,  nucl 1,  mito 1  (predict for NP_176143.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001320402.1)
other 9  (predict for NP_176143.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
Genes directly connected with RBP1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.2 MED32 mediator of RNA polymerase II transcription subunit-like protein [detail] 837720
6.1 AT1G17790 DNA-binding bromodomain-containing protein [detail] 838357
6.1 AT1G13880 ELM2 domain-containing protein [detail] 837947
5.1 AT4G00200 AT hook motif DNA-binding family protein [detail] 828162
4.4 CAX9 cation exchanger 9 [detail] 820622
Coexpressed
gene list		 [Coexpressed gene list for RBP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245808_at
245808_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245808_at
245808_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245808_at
245808_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842216      
Refseq ID (protein) NP_001320402.1 
NP_176143.1 


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