[][] ath   AT1G59720 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein
GO BP
GO:0016556 [list] [network] mRNA modification  (44 genes)  IMP  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO:0009451 [list] [network] RNA modification  (403 genes)  IBA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IEA ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO MF
GO:0004519 [list] [network] endonuclease activity  (145 genes)  IDA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_176180.1 
BLAST NP_176180.1 
Orthologous [Ortholog page] LOC4342622 (osa)LOC7461581 (ppo)LOC11408927 (mtr)LOC100253661 (vvi)LOC100791183 (gma)LOC101251285 (sly)LOC103648228 (zma)LOC103862633 (bra)
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for NP_176180.1)
Subcellular
localization
TargetP
chlo 3  (predict for NP_176180.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CRR28 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.7 AT4G01030 pentatricopeptide (PPR) repeat-containing protein [detail] 827926
5.4 CRR22 Pentatricopeptide repeat (PPR) superfamily protein [detail] 837671
5.1 AT3G22150 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 821779
5.0 AT1G62630 Disease resistance protein (CC-NBS-LRR class) family [detail] 842560
Coexpressed
gene list
[Coexpressed gene list for CRR28]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262907_at
262907_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262907_at
262907_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
262907_at
262907_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 842263    
Refseq ID (protein) NP_176180.1 


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