[←][→] ath   At1g59720 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016556 [list] [network] mRNA modification  (41 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA  
GO MF
GO:0004519 [list] [network] endonuclease activity  (108 genes)  IDA  
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_176180.1 
BLAST NP_176180.1 
Orthologous [Ortholog page] LOC4342622 (osa)  LOC7461581 (ppo)  LOC11408927 (mtr)  LOC100791183 (gma)  LOC101251285 (sly)  LOC103862633 (bra)  LOC123105693 (tae)  LOC123114023 (tae)  LOC123123512 (tae)  LOC123453067 (hvu) 
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for NP_176180.1)
Subcellular
localization
TargetP
chlo 3  (predict for NP_176180.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CRR28 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.6 AT4G01030 pentatricopeptide (PPR) repeat-containing protein [detail] 827926
6.8 PGR3 proton gradient regulation 3 [detail] 829314
6.6 CRR22 Pentatricopeptide repeat (PPR) superfamily protein [detail] 837671
Coexpressed
gene list		 [Coexpressed gene list for CRR28]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262907_at
262907_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262907_at
262907_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262907_at
262907_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842263      
Refseq ID (protein) NP_176180.1 


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