[←][→] ath   At1g60000 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0008610 [list] [network] lipid biosynthetic process  (657 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG
Protein NP_176208.1  NP_849831.1 
BLAST NP_176208.1  NP_849831.1 
Orthologous [Ortholog page] LOC4331127 (osa)  LOC7475422 (ppo)  LOC7480891 (ppo)  LOC11434981 (mtr)  LOC100801829 (gma)  LOC100820203 (gma)  LOC101246091 (sly)  LOC103838564 (bra)  LOC123128955 (tae)  LOC123135014 (tae)  LOC123146119 (tae)  LOC123401763 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_176208.1)
chlo 7,  chlo_mito 5,  mito 1  (predict for NP_849831.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_176208.1)
chlo 8  (predict for NP_849831.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 5
ath00196 Photosynthesis - antenna proteins 2
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ath01240 Biosynthesis of cofactors 2
Genes directly connected with AT1G60000 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.3 ECHID enoyl-CoA hydratase/isomerase D [detail] 842350
6.9 AT4G27700 Rhodanese/Cell cycle control phosphatase superfamily protein [detail] 828884
6.8 CAO chloroplast signal recognition particle component (CAO) [detail] 819358
Coexpressed
gene list		 [Coexpressed gene list for AT1G60000]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263736_at
263736_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263736_at
263736_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263736_at
263736_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842294      
Refseq ID (protein) NP_176208.1 
NP_849831.1 


The preparation time of this page was 0.2 [sec].