[←][→] ath   AT1G60200 Gene
functional annotation
Function   splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein  
GO BP
GO:0009414 [list] [network] response to water deprivation  (361 genes)  IMP  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001321661.1  NP_001321662.1  NP_001321663.1  NP_176226.3 
BLAST NP_001321661.1  NP_001321662.1  NP_001321663.1  NP_176226.3 
Orthologous [Ortholog page] LOC4345578 (osa)  LOC7459056 (ppo)  LOC11405951 (mtr)  LOC100263874 (vvi)  LOC100803051 (gma)  LOC100809428 (gma)  LOC101253282 (sly)  LOC103643327 (zma)  LOC103653436 (zma)  LOC103829743 (bra) 
Subcellular
localization
wolf
chlo 9,  nucl 1,  cyto_mito 1  (predict for NP_001321661.1)
chlo 9,  nucl 1,  cyto_mito 1  (predict for NP_001321662.1)
chlo 9,  nucl 1,  cyto_mito 1  (predict for NP_001321663.1)
nucl 9,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_176226.3)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for NP_001321661.1)
mito 5,  chlo 4  (predict for NP_001321662.1)
mito 5,  chlo 4  (predict for NP_001321663.1)
chlo 9,  other 4  (predict for NP_176226.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03013 RNA transport 2
Genes directly connected with AT1G60200 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.7 AT1G70620 cyclin-like protein [detail] 843399
11.4 AT4G36980 CLK4-associating serine/arginine-rich protein [detail] 829852
10.3 AT1G10890 arginine/glutamate-rich 1 protein [detail] 837632
9.4 U1-70K U1 small nuclear ribonucleoprotein-70K [detail] 824230
8.4 DDL SMAD/FHA domain-containing protein [detail] 821601
7.2 AT1G19485 Transducin/WD40 repeat-like superfamily protein [detail] 838534
6.8 DCL1 dicer-like 1 [detail] 839574
6.6 AT1G21610 wound-responsive family protein [detail] 838762
6.3 La2 RNA recognition motif (RRM)-containing protein [detail] 844327
6.2 AT1G76720 eukaryotic translation initiation factor 2 (eIF-2) family protein [detail] 844006
6.0 XPB1 DNA repair helicase XPB1-like protein [detail] 834139
Coexpressed
gene list		 [Coexpressed gene list for AT1G60200]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264267_at
264267_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264267_at
264267_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264267_at
264267_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842315      
Refseq ID (protein) NP_001321661.1 
NP_001321662.1 
NP_001321663.1 
NP_176226.3 


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