[←][→] ath   At1g60590 Gene
functional annotation
Function   Pectin lyase-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006631 [list] [network] fatty acid metabolic process  (214 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (844 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (68 genes)  IEA  
KEGG
Protein NP_564758.2 
BLAST NP_564758.2 
Orthologous [Ortholog page] LOC547542 (gma)  LOC547543 (gma)  LOC732602 (gma)  AT5G14650 (ath)  AT1G10640 (ath)  LOC4326573 (osa)  LOC4339708 (osa)  LOC7469060 (ppo)  LOC7492392 (ppo)  LOC7496835 (ppo)  LOC11407103 (mtr)  LOC11423776 (mtr)  LOC25501370 (mtr)  LOC100783813 (gma)  LOC101246713 (sly)  LOC101253391 (sly)  LOC103838503 (bra)  LOC103843286 (bra)  LOC103846471 (bra)  LOC103868082 (bra)  LOC103871846 (bra)  LOC107276443 (osa)  LOC123061559 (tae)  LOC123070193 (tae)  LOC123183244 (tae)  LOC123443940 (hvu)  LOC123451668 (hvu) 
Subcellular
localization
wolf
chlo 8,  nucl 1,  mito 1,  extr 1  (predict for NP_564758.2)
Subcellular
localization
TargetP
mito 2  (predict for NP_564758.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
Genes directly connected with AT1G60590 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.4 AT1G10640 Pectin lyase-like superfamily protein [detail] 837607
7.2 AT1G48100 Pectin lyase-like superfamily protein [detail] 841228
7.0 AT1G23205 Plant invertase/pectin methylesterase inhibitor superfamily protein [detail] 838929
6.2 AT5G19730 Pectin lyase-like superfamily protein [detail] 832093
5.4 AT1G20870 HSP20-like chaperones superfamily protein [detail] 838680
4.4 AT2G31560 signal transducer/transcription protein, putative (DUF1685) [detail] 817714
Coexpressed
gene list		 [Coexpressed gene list for AT1G60590]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264931_at
264931_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264931_at
264931_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264931_at
264931_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842353      
Refseq ID (protein) NP_564758.2 


The preparation time of this page was 0.1 [sec].