| functional annotation |
| Function |
UbiA prenyltransferase family protein |
|
| GO BP |
|
GO:0032194 [list] [network] ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate
|
(1 genes)
|
IBA
|
 |
|
GO:0042371 [list] [network] vitamin K biosynthetic process
|
(1 genes)
|
IBA
|
|
|
GO:0009772 [list] [network] photosynthetic electron transport in photosystem II
|
(5 genes)
|
IMP
|
|
|
GO:0010236 [list] [network] plastoquinone biosynthetic process
|
(7 genes)
|
IMP
|
|
|
GO:0042372 [list] [network] phylloquinone biosynthetic process
|
(9 genes)
|
IBA
IMP
|
|
|
| GO CC |
|
GO:0031969 [list] [network] chloroplast membrane
|
(259 genes)
|
IEA
|
|
|
GO:0005886 [list] [network] plasma membrane
|
(3771 genes)
|
ISM
|
|
|
GO:0016021 [list] [network] integral component of membrane
|
(4803 genes)
|
IEA
|
|
|
GO:0009507 [list] [network] chloroplast
|
(5095 genes)
|
IDA
|
|
|
| GO MF |
|
GO:0046428 [list] [network] 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity
|
(1 genes)
|
ISS
|
|
|
GO:0004659 [list] [network] prenyltransferase activity
|
(42 genes)
|
IBA
|
|
|
| KEGG |
ath00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (38 genes) |
 |
| Protein |
NP_001117518.1
NP_176259.2
|
| BLAST |
NP_001117518.1
NP_176259.2
|
| Orthologous |
[Ortholog page]
LOC4331897 (osa)
LOC7496610 (ppo)
LOC11410823 (mtr)
LOC100256517 (vvi)
LOC100285808 (zma)
LOC100790629 (gma)
LOC100791902 (gma)
LOC101248721 (sly)
LOC103829906 (bra)
|
Subcellular
localization
wolf |
|
plas 6,
vacu 3
|
(predict for NP_001117518.1)
|
|
plas 6,
E.R. 1,
cyto 1,
extr 1,
vacu 1,
golg 1
|
(predict for NP_176259.2)
|
|
Subcellular
localization
TargetP |
|
other 5,
chlo 5
|
(predict for NP_001117518.1)
|
|
mito 4,
scret 3
|
(predict for NP_176259.2)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03010 |
Ribosome |
2 |
 |
Genes directly connected with ABC4 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 8.5 |
AT5G27390 |
tagatose-6-phosphate ketose/aldose isomerase, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein) |
[detail] |
832798 |
| 8.0 |
EGY2 |
ethylene-dependent gravitropism-deficient and yellow-green-like 2 |
[detail] |
830458 |
| 7.6 |
EGY1 |
Peptidase M50 family protein |
[detail] |
833476 |
| 7.3 |
AT5G10690 |
pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein |
[detail] |
830933 |
| 7.3 |
AT1G14270 |
CAAX amino terminal protease family protein |
[detail] |
837988 |
| 5.6 |
AT1G78180 |
Mitochondrial substrate carrier family protein |
[detail] |
844154 |
| 5.5 |
AT5G47900 |
heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624) |
[detail] |
834841 |
|
Coexpressed
gene list |
[Coexpressed gene list for ABC4]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
264963_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
264963_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
264963_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT1G60600 Gene
