[←][→] ath   At1g61520 Gene
functional annotation
Function   PSI type III chlorophyll a/b-binding protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (10 genes)  IDA  
GO:0009645 [list] [network] response to low light intensity stimulus  (33 genes)  IEP  
GO:0009644 [list] [network] response to high light intensity  (65 genes)  IEP  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP  
GO CC
GO:0010287 [list] [network] plastoglobule  (57 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
GO:0016168 [list] [network] chlorophyll binding  (21 genes)  ISS  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00196 [list] [network] Photosynthesis - antenna proteins (22 genes)
Protein NP_001031217.1  NP_001185280.1  NP_176347.1 
BLAST NP_001031217.1  NP_001185280.1  NP_176347.1 
Orthologous [Ortholog page] LOC4328623 (osa)  LOC7469352 (ppo)  LOC11424077 (mtr)  LOC25494983 (mtr)  LOC100784090 (gma)  LOC100808379 (gma)  CAB-8 (sly)  LOC101265617 (sly)  LOC103830657 (bra)  LOC103838443 (bra)  LOC123132593 (tae)  LOC123136719 (tae)  LOC123144198 (tae)  LOC123401080 (hvu) 
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 1,  pero 1,  cyto_E.R. 1  (predict for NP_001031217.1)
chlo 10  (predict for NP_001185280.1)
chlo 10  (predict for NP_176347.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001031217.1)
chlo 8  (predict for NP_001185280.1)
chlo 8  (predict for NP_176347.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 10
ath00196 Photosynthesis - antenna proteins 9
Genes directly connected with LHCA3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
23.3 LHCA1 chlorophyll a-b binding protein 6 [detail] 824654
22.8 LHCB5 light harvesting complex of photosystem II 5 [detail] 826626
21.8 LHCB3 light-harvesting chlorophyll B-binding protein 3 [detail] 835515
21.0 LHCA4 light-harvesting chlorophyll-protein complex I subunit A4 [detail] 823901
19.6 PSBP-1 photosystem II subunit P-1 [detail] 837178
18.5 PSBQ-2 photosystem II subunit Q-2 [detail] 825866
17.9 LHCB4.1 light harvesting complex photosystem II [detail] 830325
13.4 AT5G19940 Plastid-lipid associated protein PAP / fibrillin family protein [detail] 832116
Coexpressed
gene list		 [Coexpressed gene list for LHCA3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265033_at
265033_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265033_at
265033_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265033_at
265033_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842446      
Refseq ID (protein) NP_001031217.1 
NP_001185280.1 
NP_176347.1 


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