[←][→] ath   At1g62830 Gene
functional annotation
Function   LSD1-like 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0016575 [list] [network] histone deacetylation  (15 genes)  IMP  
GO:0051568 [list] [network] histone H3-K4 methylation  (15 genes)  IMP  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (205 genes)  IDA  
GO:0048364 [list] [network] root development  (1192 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_176471.1 
BLAST NP_176471.1 
Orthologous [Ortholog page] LOC4330771 (osa)  LOC7496880 (ppo)  LOC25496860 (mtr)  LOC102659364 (gma)  LOC103838362 (bra)  LOC104649682 (sly)  LOC106794445 (gma)  LOC123128465 (tae)  LOC123138344 (tae)  LOC123145588 (tae)  LOC123402859 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_176471.1)
Subcellular
localization
TargetP
other 9  (predict for NP_176471.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with LDL1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.4 AT1G72090 Methylthiotransferase [detail] 843540
7.0 AT2G13690 PRLI-interacting factor [detail] 815853
6.7 TOR1 ARM repeat superfamily protein [detail] 828814
6.5 AT5G48990 Galactose oxidase/kelch repeat superfamily protein [detail] 834958
6.2 AT1G10180 LOW protein: exocyst complex component-like protein [detail] 837556
5.7 AT3G46990 DUF740 family protein, putative (DUF740) [detail] 823852
5.3 AT1G27690 lipase, putative (DUF620) [detail] 839661
Coexpressed
gene list		 [Coexpressed gene list for LDL1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262668_at
262668_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262668_at
262668_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262668_at
262668_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842582      
Refseq ID (protein) NP_176471.1 


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