[←][→] ath   AT1G62830 Gene
functional annotation
Function   LSD1-like 1  
GO BP
GO:0051568 [list] [network] histone H3-K4 methylation  (10 genes)  IMP  
GO:0016575 [list] [network] histone deacetylation  (33 genes)  IMP  
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated  (253 genes)  IDA  
GO:0048364 [list] [network] root development  (482 genes)  IMP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0016491 [list] [network] oxidoreductase activity  (1435 genes)  IBA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_176471.1 
BLAST NP_176471.1 
Orthologous [Ortholog page] LOC4330771 (osa)  LOC7496880 (ppo)  LOC25496860 (mtr)  LOC100245322 (vvi)  LOC102659364 (gma)  LOC103627761 (zma)  LOC103838362 (bra)  LOC104649682 (sly)  LOC106794445 (gma) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_176471.1)
Subcellular
localization
TargetP
other 9  (predict for NP_176471.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with LDL1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.9 AT2G13690 PRLI-interacting factor [detail] 815853
5.9 AT1G72090 Methylthiotransferase [detail] 843540
5.8 TOR1 ARM repeat superfamily protein [detail] 828814
5.2 AT3G46990 DUF740 family protein, putative (DUF740) [detail] 823852
Coexpressed
gene list		 [Coexpressed gene list for LDL1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262668_at
262668_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262668_at
262668_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262668_at
262668_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842582      
Refseq ID (protein) NP_176471.1 


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