ATTED-II : GeneID search result

[←][→] ath AT1G65920 Gene

functional annotation

Function

Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein

GO BP

GO CC

GO:0005773 [list] [network] vacuole	(1133 genes)	IDA
GO:0005794 [list] [network] Golgi apparatus	(1430 genes)	ISM
GO:0005886 [list] [network] plasma membrane	(3771 genes)	IDA

GO MF

GO:0046872 [list] [network] metal ion binding

(3180 genes)

IEA

KEGG

Protein

NP_001320309.1 NP_176767.1

BLAST

NP_001320309.1 NP_176767.1

Orthologous

[Ortholog page] LOC4330348 (osa) LOC4336778 (osa) LOC11406734 (mtr) LOC100253065 (vvi) LOC100794953 (gma) G93 (gma) LOC101256142 (sly) LOC101267670 (sly) LOC103646027 (zma) LOC103653921 (zma) LOC103849089 (bra)

Subcellular
localization
wolf

nucl 10	(predict for NP_001320309.1)
nucl 9	(predict for NP_176767.1)

Subcellular
localization
TargetP

other 9, mito 3	(predict for NP_001320309.1)
other 8	(predict for NP_176767.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00904	Diterpenoid biosynthesis	3

Genes directly connected with AT1G65920 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.1	AT2G41820	Leucine-rich repeat protein kinase family protein	[detail]	818781
5.3	CSLC5	Cellulose-synthase-like C5	[detail]	829286
5.3	GA20OX1	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[detail]	828645

Coexpressed
gene list

[Coexpressed gene list for AT1G65920]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

261917_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

261917_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

261917_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	842904
Refseq ID (protein)	NP_001320309.1
Refseq ID (protein)	NP_176767.1

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