[←][→] ath   At1g65930 Gene
functional annotation
Function   cytosolic NADP+-dependent isocitrate dehydrogenase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006102 [list] [network] isocitrate metabolic process  (9 genes)  IMP  
GO:0006739 [list] [network] NADP metabolic process  (29 genes)  IMP  
GO:0010043 [list] [network] response to zinc ion  (46 genes)  IEP  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IMP  
GO CC
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA NAS  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
GO:0004450 [list] [network] isocitrate dehydrogenase (NADP+) activity  (1 genes)  IMP  
GO:0005507 [list] [network] copper ion binding  (132 genes)  HDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00020 [list] [network] Citrate cycle (TCA cycle) (64 genes)
ath00480 [list] [network] Glutathione metabolism (103 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (74 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
ath04146 [list] [network] Peroxisome (88 genes)
Protein NP_176768.1 
BLAST NP_176768.1 
Orthologous [Ortholog page] IDH1 (gma)  AT5G14590 (ath)  ICDH (ath)  LOC4324176 (osa)  LOC4327213 (osa)  LOC4336353 (osa)  LOC4339674 (osa)  LOC7462131 (ppo)  LOC7464575 (ppo)  LOC7468338 (ppo)  LOC7487863 (ppo)  LOC11419675 (mtr)  LOC11425956 (mtr)  LOC11445769 (mtr)  LOC18106487 (ppo)  LOC100786103 (gma)  IDH (gma)  LOC100816688 (gma)  LOC100819151 (gma)  LOC101248445 (sly)  LOC101255848 (sly)  LOC101268602 (sly)  LOC103830157 (bra)  LOC103831074 (bra)  LOC103849095 (bra)  LOC103852304 (bra)  LOC103856088 (bra)  LOC112325627 (ppo)  LOC123045993 (tae)  LOC123053862 (tae)  LOC123060892 (tae)  LOC123061628 (tae)  LOC123069513 (tae)  LOC123070247 (tae)  LOC123078014 (tae)  LOC123078694 (tae)  LOC123189737 (tae)  LOC123427205 (hvu)  LOC123443354 (hvu)  LOC123443997 (hvu) 
Subcellular
localization
wolf
cyto 5,  cysk 5  (predict for NP_176768.1)
Subcellular
localization
TargetP
other 9  (predict for NP_176768.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 12
ath01230 Biosynthesis of amino acids 10
ath00010 Glycolysis / Gluconeogenesis 8
ath00710 Carbon fixation in photosynthetic organisms 7
ath00270 Cysteine and methionine metabolism 5
Genes directly connected with cICDH on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.0 c-NAD-MDH1 Lactate/malate dehydrogenase family protein [detail] 839527
5.9 CYSC1 cysteine synthase C1 [detail] 825317
5.6 LOS2 Enolase [detail] 818226
Coexpressed
gene list		 [Coexpressed gene list for cICDH]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261920_at
261920_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261920_at
261920_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261920_at
261920_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842905      
Refseq ID (protein) NP_176768.1 


The preparation time of this page was 0.2 [sec].