[←][→] ath   AT1G65930 Gene
functional annotation
Function   cytosolic NADP+-dependent isocitrate dehydrogenase  
GO BP
GO:0006102 [list] [network] isocitrate metabolic process  (12 genes)  IBA IMP  
GO:0006739 [list] [network] NADP metabolic process  (41 genes)  IBA IMP  
GO:0010043 [list] [network] response to zinc ion  (42 genes)  IEP  
GO:0006099 [list] [network] tricarboxylic acid cycle  (54 genes)  IEA  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IMP  
GO CC
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA NAS  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IBA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0004450 [list] [network] isocitrate dehydrogenase (NADP+) activity  (3 genes)  IBA IMP  
GO:0051287 [list] [network] NAD binding  (66 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (115 genes)  IEA  
GO:0005507 [list] [network] copper ion binding  (185 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00020 [list] [network] Citrate cycle (TCA cycle) (63 genes)
ath00480 [list] [network] Glutathione metabolism (102 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (74 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
ath04146 [list] [network] Peroxisome (87 genes)
Protein NP_176768.1 
BLAST NP_176768.1 
Orthologous [Ortholog page] IDH1 (gma)  AT5G14590 (ath)  ICDH (ath)  LOC4324176 (osa)  LOC4327213 (osa)  LOC4336353 (osa)  LOC4339674 (osa)  LOC7464575 (ppo)  LOC7468338 (ppo)  LOC7487863 (ppo)  LOC11419675 (mtr)  LOC11425956 (mtr)  LOC11445769 (mtr)  LOC100191657 (zma)  LOC100217128 (zma)  LOC100243260 (vvi)  LOC100249290 (vvi)  LOC100261578 (vvi)  LOC100272371 (zma)  LOC100274592 (zma)  LOC100786103 (gma)  IDH (gma)  LOC100816688 (gma)  LOC100819151 (gma)  LOC101248445 (sly)  LOC101255848 (sly)  LOC101268602 (sly)  LOC103830157 (bra)  LOC103831074 (bra)  LOC103849095 (bra)  LOC103852304 (bra)  LOC103856088 (bra) 
Subcellular
localization
wolf
cyto 5,  cysk 5  (predict for NP_176768.1)
Subcellular
localization
TargetP
other 9  (predict for NP_176768.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 7
ath00010 Glycolysis / Gluconeogenesis 4
ath01230 Biosynthesis of amino acids 4
ath00270 Cysteine and methionine metabolism 4
ath00190 Oxidative phosphorylation 4
Genes directly connected with cICDH on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.1 c-NAD-MDH1 Lactate/malate dehydrogenase family protein [detail] 839527
5.4 GAMMA CA3 gamma carbonic anhydrase 3 [detail] 836783
5.2 CYSC1 cysteine synthase C1 [detail] 825317
Coexpressed
gene list		 [Coexpressed gene list for cICDH]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
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261920_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
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261920_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
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261920_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842905      
Refseq ID (protein) NP_176768.1 


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