[←][→] ath   At1g65960 Gene
functional annotation
Function   glutamate decarboxylase 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006536 [list] [network] glutamate metabolic process  (17 genes)  IDA IEA  
GO:0006807 [list] [network] nitrogen compound metabolic process  (5259 genes)  TAS  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
GO:0004351 [list] [network] glutamate decarboxylase activity  (2 genes)  IDA  
GO:0005516 [list] [network] calmodulin binding  (128 genes)  TAS  
KEGG ath00250 [list] [network] Alanine, aspartate and glutamate metabolism (51 genes)
ath00410 [list] [network] beta-Alanine metabolism (47 genes)
ath00430 [list] [network] Taurine and hypotaurine metabolism (11 genes)
ath00650 [list] [network] Butanoate metabolism (20 genes)
Protein NP_001117556.1  NP_001319328.1  NP_001320515.1  NP_176771.2 
BLAST NP_001117556.1  NP_001319328.1  NP_001320515.1  NP_176771.2 
Orthologous [Ortholog page] LOC544313 (sly)  LOC547724 (gma)  GAD3 (ath)  GAD4 (ath)  GAD5 (ath)  GAD (ath)  LOC4332184 (osa)  LOC4333932 (osa)  LOC4335973 (osa)  LOC4335977 (osa)  LOC4345787 (osa)  LOC7457832 (ppo)  LOC7459087 (ppo)  LOC7468337 (ppo)  LOC7485189 (ppo)  LOC7494518 (ppo)  LOC11408278 (mtr)  LOC11433639 (mtr)  LOC18106489 (ppo)  LOC25496687 (mtr)  GAD2 (sly)  GAD3 (sly)  LOC100781791 (gma)  LOC100782330 (gma)  LOC100783047 (gma)  LOC100787167 (gma)  LOC100791696 (gma)  LOC100796475 (gma)  LOC100796533 (gma)  LOC100812201 (gma)  LOC101251185 (sly)  LOC101259235 (sly)  LOC103831077 (bra)  LOC103839037 (bra)  LOC103839459 (bra)  LOC103840927 (bra)  LOC103846253 (bra)  LOC103851100 (bra)  LOC103854027 (bra)  LOC103856242 (bra)  LOC103856243 (bra)  LOC103869654 (bra)  LOC120577330 (mtr)  LOC123045593 (tae)  LOC123049436 (tae)  LOC123053432 (tae)  LOC123059574 (tae)  LOC123068277 (tae)  LOC123075872 (tae)  LOC123082841 (tae)  LOC123085230 (tae)  LOC123087067 (tae)  LOC123090897 (tae)  LOC123092844 (tae)  LOC123095925 (tae)  LOC123100106 (tae)  LOC123185528 (tae)  LOC123189339 (tae)  LOC123430343 (hvu)  LOC123430344 (hvu)  LOC123441085 (hvu)  LOC123442422 (hvu)  LOC123446734 (hvu)  LOC123447564 (hvu) 
Subcellular
localization
wolf
cyto 8,  nucl 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for NP_001117556.1)
cyto 3,  mito 3,  chlo 2,  nucl 2  (predict for NP_001319328.1)
cyto 3,  mito 3,  chlo 2,  nucl 2  (predict for NP_001320515.1)
cyto 3,  mito 3,  chlo 2,  nucl 2  (predict for NP_176771.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001117556.1)
mito 6,  other 5  (predict for NP_001319328.1)
mito 6,  other 5  (predict for NP_001320515.1)
mito 6,  other 5  (predict for NP_176771.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00600 Sphingolipid metabolism 2
ath00500 Starch and sucrose metabolism 2
Genes directly connected with GAD2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.4 POM1 Chitinase family protein [detail] 837095
5.1 AT3G19340 aminopeptidase (DUF3754) [detail] 821468
4.7 PIA1 PP2C induced by AVRRPM1 [detail] 816590
4.6 AGAL2 alpha-galactosidase 2 [detail] 830735
Coexpressed
gene list		 [Coexpressed gene list for GAD2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261970_at
261970_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261970_at
261970_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261970_at
261970_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842908      
Refseq ID (protein) NP_001117556.1 
NP_001319328.1 
NP_001320515.1 
NP_176771.2 


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