[][] ath   AT1G66660 Gene
functional annotation
Function   Protein with RING/U-box and TRAF-like domain
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0016740 [list] [network] transferase activity  (3833 genes)  IEA  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_001077779.1  NP_176839.2 
BLAST NP_001077779.1  NP_176839.2 
Orthologous [Ortholog page] AT5G37870 (ath)AT5G37890 (ath)AT5G37900 (ath)AT5G37910 (ath)AT5G37930 (ath)AT5G62800 (ath)AT1G66610 (ath)AT1G66620 (ath)AT1G66630 (ath)AT1G66650 (ath)LOC4340862 (osa)LOC7493536 (ppo)LOC7494532 (ppo)LOC11418747 (mtr)LOC11425847 (mtr)LOC11436875 (mtr)LOC11437704 (mtr)LOC11445862 (mtr)LOC25483069 (mtr)LOC25483070 (mtr)LOC25493350 (mtr)LOC25494869 (mtr)LOC25499082 (mtr)LOC100260463 (vvi)LOC100273809 (zma)LOC100778869 (gma)LOC100797881 (gma)LOC101256260 (sly)LOC101256849 (sly)LOC101262084 (sly)LOC101262896 (sly)LOC102662420 (gma)LOC103829298 (bra)LOC103831113 (bra)LOC103831115 (bra)LOC103841498 (bra)LOC103850097 (bra)LOC103857391 (bra)LOC103860069 (bra)LOC103863762 (bra)LOC103864155 (bra)LOC103864598 (bra)LOC103867898 (bra)LOC103872071 (bra)LOC104646203 (sly)LOC109119263 (sly)LOC109119702 (sly)
Subcellular
localization
wolf
nucl 4,  cyto 4,  pero 1  (predict for NP_001077779.1)
cyto 5,  extr 2,  chlo 1,  nucl 1,  plas 1,  golg 1,  nucl_plas 1,  golg_plas 1  (predict for NP_176839.2)
Subcellular
localization
TargetP
chlo 4,  mito 3,  other 3  (predict for NP_001077779.1)
other 4  (predict for NP_176839.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G66660 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.6 AT3G53440 Homeodomain-like superfamily protein [detail] 824512
5.4 AT5G27460 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 832805
5.0 AT1G11630 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837707
4.4 AT1G14770 RING/FYVE/PHD zinc finger superfamily protein [detail] 838042
4.3 AT4G19010 AMP-dependent synthetase and ligase family protein [detail] 827639
Coexpressed
gene list
[Coexpressed gene list for AT1G66660]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256384_at
256384_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256384_at
256384_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
256384_at
256384_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 842984    
Refseq ID (protein) NP_001077779.1 
NP_176839.2 


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