[←][→] ath   At1g67230 Gene
functional annotation
Function   little nuclei1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0097298 [list] [network] regulation of nucleus size  (4 genes)  IMP  
GO:0006997 [list] [network] nucleus organization  (50 genes)  IGI IMP  
GO CC
GO:0005652 [list] [network] nuclear lamina  (2 genes)  IDA  
GO:0034399 [list] [network] nuclear periphery  (11 genes)  IDA  
GO:0005635 [list] [network] nuclear envelope  (98 genes)  IDA  
GO:0000785 [list] [network] chromatin  (135 genes)  IDA  
GO:0005654 [list] [network] nucleoplasm  (253 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_176892.1 
BLAST NP_176892.1 
Orthologous [Ortholog page] LINC2 (ath)  LINC3 (ath)  LOC4330487 (osa)  LOC7485949 (ppo)  LOC18107408 (ppo)  LOC25495346 (mtr)  LOC25497658 (mtr)  LOC100802673 (gma)  LOC100803601 (gma)  LOC100805888 (gma)  LOC100816589 (gma)  LOC101255471 (sly)  LOC101264275 (sly)  LOC103831155 (bra)  LOC103852383 (bra)  LOC103852523 (bra)  LOC103871951 (bra)  LOC113001403 (gma)  LOC123128155 (tae)  LOC123137957 (tae)  LOC123145256 (tae)  LOC123401394 (hvu) 
Subcellular
localization
wolf
chlo 3,  nucl 3,  cyto 3,  cyto_nucl 3  (predict for NP_176892.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_176892.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with LINC1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.2 AT4G31880 transcriptional regulator [detail] 829318
7.4 DOT2 SART-1 family [detail] 831541
7.3 AT3G49601 pre-mRNA-splicing factor [detail] 6241216
6.7 AT5G55040 DNA-binding bromodomain-containing protein [detail] 835595
Coexpressed
gene list		 [Coexpressed gene list for LINC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264996_at
264996_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264996_at
264996_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264996_at
264996_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843043      
Refseq ID (protein) NP_176892.1 


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