[][] ath   AT1G67320 Gene
functional annotation
Function   DNA primase, large subunit family
GO BP
GO:0006269 [list] [network] DNA replication, synthesis of RNA primer  (3 genes)  IEA  
GO CC
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (81 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03030 [list] [network] DNA replication (50 genes)
Protein NP_001185339.1  NP_001185340.1  NP_564893.2 
BLAST NP_001185339.1  NP_001185340.1  NP_564893.2 
Orthologous [Ortholog page] LOC4342990 (osa)LOC7481211 (ppo)LOC11439551 (mtr)LOC100191752 (zma)LOC100244238 (vvi)LOC100384853 (zma)LOC100806321 (gma)LOC100816023 (gma)LOC101266715 (sly)LOC103831035 (bra)LOC103852392 (bra)
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1  (predict for NP_001185339.1)
cyto 5,  nucl 2,  chlo 1,  mito 1,  pero 1  (predict for NP_001185340.1)
cyto 5,  nucl 2,  chlo 1,  mito 1,  pero 1  (predict for NP_564893.2)
Subcellular
localization
TargetP
other 5  (predict for NP_001185339.1)
other 5  (predict for NP_001185340.1)
other 5  (predict for NP_564893.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 13
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath03440 Homologous recombination 2
Genes directly connected with EMB2813 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
16.1 POLA3 DNA primase POLA3 [detail] 834193
14.6 ETG1 E2F target protein 1 (ETG1) [detail] 818650
14.1 MCM5 Minichromosome maintenance (MCM2/3/5) family protein [detail] 815415
9.5 AT2G24970 spindle/kinetochore-associated protein [detail] 817036
7.7 AT5G25580 hypothetical protein [detail] 832633
6.9 RBR1 retinoblastoma-related 1 [detail] 820408
6.2 AT1G05950 hypothetical protein [detail] 837105
5.5 PSF1 partner of SLD five 1 [detail] 844359
Coexpressed
gene list
[Coexpressed gene list for EMB2813]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264969_at
264969_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264969_at
264969_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
264969_at
264969_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 843052    
Refseq ID (protein) NP_001185339.1 
NP_001185340.1 
NP_564893.2 


The preparation time of this page was 0.2 [sec].