ATTED-II : GeneID search result

[←][→] ath AT1G67560 Gene

functional annotation

Function

PLAT/LH2 domain-containing lipoxygenase family protein

GO BP

GO:0031408 [list] [network] oxylipin biosynthetic process	(23 genes)	IEA
GO:0009695 [list] [network] jasmonic acid biosynthetic process	(27 genes)	IMP
GO:0034440 [list] [network] lipid oxidation	(49 genes)	IDA
GO:0009611 [list] [network] response to wounding	(212 genes)	IMP

GO CC

GO:0005886 [list] [network] plasma membrane	(3771 genes)	IDA
GO:0009507 [list] [network] chloroplast	(5095 genes)	IEA ISM

GO MF

GO:0016165 [list] [network] linoleate 13S-lipoxygenase activity	(4 genes)	IDA
GO:0046872 [list] [network] metal ion binding	(3180 genes)	IEA

KEGG

ath00591 [list] [network] Linoleic acid metabolism (9 genes)

ath00592 [list] [network] alpha-Linolenic acid metabolism (44 genes)

Protein

NP_176923.1

BLAST

NP_176923.1

Orthologous

[Ortholog page] LOC7494782 (ppo) LOC25501722 (mtr) LOC100244202 (vvi) LOC100814410 (gma) LOC101263024 (sly) LOC103831021 (bra) LOC103852410 (bra)

Subcellular
localization
wolf

chlo 9, nucl 1, E.R. 1

(predict for NP_176923.1)

Subcellular
localization
TargetP

chlo 8

(predict for NP_176923.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with LOX6 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
4.9	AT4G27870	Vacuolar iron transporter (VIT) family protein	[detail]	828900
4.7	MEB1	vacuolar iron transporter (VIT) family protein	[detail]	828899
4.2	AT1G06620	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[detail]	837171

Coexpressed
gene list

[Coexpressed gene list for LOX6]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

260190_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

260190_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

260190_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	843077
Refseq ID (protein)	NP_176923.1

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