[←][→] ath   At1g67740 Gene
functional annotation
Function   photosystem II BY    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010205 [list] [network] photoinhibition  (11 genes)  IMP  
GO:0045454 [list] [network] cell redox homeostasis  (27 genes)  IMP  
GO:0015979 [list] [network] photosynthesis  (167 genes)  TAS  
GO CC
GO:0009533 [list] [network] chloroplast stromal thylakoid  (8 genes)  IDA  
GO:0009523 [list] [network] photosystem II  (29 genes)  ISS  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0030145 [list] [network] manganese ion binding  (44 genes)  IEA  
KEGG ath00195 [list] [network] Photosynthesis (77 genes)
Protein NP_176940.1 
BLAST NP_176940.1 
Orthologous [Ortholog page] LOC4344539 (osa)  LOC7460727 (ppo)  LOC7480941 (ppo)  LOC11416110 (mtr)  LOC25501820 (mtr)  LOC100500004 (gma)  LOC100779397 (gma)  LOC100814665 (gma)  LOC101259494 (sly)  LOC103831013 (bra)  LOC103831199 (bra)  LOC103852422 (bra)  LOC123147504 (tae)  LOC123157070 (tae)  LOC123165132 (tae)  LOC123411185 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_176940.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_176940.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 15
ath00196 Photosynthesis - antenna proteins 4
Genes directly connected with PSBY on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
17.8 PSAD-1 photosystem I subunit D-1 [detail] 828183
14.5 PSAL photosystem I subunit l [detail] 826892
14.3 PSBP-1 photosystem II subunit P-1 [detail] 837178
12.7 TLP18.3 thylakoid lumen 18.3 kDa protein [detail] 841919
10.6 ATPD F-type H+-transporting ATPase subunit delta [detail] 826551
9.6 PSB27 photosystem II family protein [detail] 839449
Coexpressed
gene list		 [Coexpressed gene list for PSBY]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245195_at
245195_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245195_at
245195_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245195_at
245195_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843099      
Refseq ID (protein) NP_176940.1 


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