[←][→] ath   AT1G68790 Gene
functional annotation
Function   little nuclei3  
GO BP
GO:0006997 [list] [network] nucleus organization  (58 genes)  IMP  
GO:0006974 [list] [network] cellular response to DNA damage stimulus  (329 genes)  IGI  
GO CC
GO:0005652 [list] [network] nuclear lamina  (4 genes)  IEA  
GO:0031965 [list] [network] nuclear membrane  (42 genes)  IEA  
GO:0005654 [list] [network] nucleoplasm  (444 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA ISM  
GO MF
KEGG
Protein NP_177046.1 
BLAST NP_177046.1 
Orthologous [Ortholog page] LINC2 (ath)  LINC1 (ath)  LOC4330487 (osa)  LOC25497658 (mtr)  LOC100242259 (vvi)  LOC100248029 (vvi)  LOC100802673 (gma)  LOC100803601 (gma)  LOC100805888 (gma)  LOC100816589 (gma)  LOC101255471 (sly)  LOC101264275 (sly)  LOC103653975 (zma)  LOC103831155 (bra)  LOC103852383 (bra)  LOC103852523 (bra)  LOC103871951 (bra)  LOC113001403 (gma) 
Subcellular
localization
wolf
cyto 9  (predict for NP_177046.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for NP_177046.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with LINC3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.2 AT5G55660 DEK domain-containing chromatin associated protein [detail] 835660
10.6 LINC4 branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5);little nuclei4 [detail] 836706
10.1 AT4G08310 DNA ligase [detail] 826385
9.9 AT3G54760 dentin sialophosphoprotein-like protein [detail] 824641
9.5 AT4G26630 DEK domain-containing chromatin associated protein [detail] 828770
9.3 PKL chromatin remodeling factor CHD3 (PICKLE) [detail] 817055
9.1 AT1G15940 Tudor/PWWP/MBT superfamily protein [detail] 838164
9.1 AT5G40340 Tudor/PWWP/MBT superfamily protein [detail] 834032
9.0 TADA tRNA arginine adenosine deaminase [detail] 843202
8.5 FDM5 XH/XS domain-containing protein [detail] 844418
7.1 CIP4 COP1-interacting protein 4 [detail] 833693
7.1 RIP2 ROP interactive partner 3 [detail] 818284
Coexpressed
gene list		 [Coexpressed gene list for LINC3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260031_at
260031_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260031_at
260031_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260031_at
260031_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843210      
Refseq ID (protein) NP_177046.1 


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