[←][→] ath   AT1G71980 Gene
functional annotation
Function   Protease-associated (PA) RING/U-box zinc finger family protein  
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0032586 [list] [network] protein storage vacuole membrane  (6 genes)  IEA  
GO:0000326 [list] [network] protein storage vacuole  (12 genes)  IDA  
GO:0000139 [list] [network] Golgi membrane  (404 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_177343.2 
BLAST NP_177343.2 
Orthologous [Ortholog page] LOC4331745 (osa)  LOC4344437 (osa)  LOC7475798 (ppo)  LOC25484985 (mtr)  LOC100246359 (vvi)  LOC100279400 (zma)  LOC100281566 (zma)  LOC100502318 (zma)  LOC100791248 (gma)  LOC100793048 (gma)  LOC101248068 (sly)  LOC101252295 (sly)  LOC103831712 (bra) 
Subcellular
localization
wolf
golg 2,  golg_plas 2,  chlo 2,  plas 1,  vacu 1,  E.R. 1,  chlo_mito 1,  E.R._vacu 1  (predict for NP_177343.2)
Subcellular
localization
TargetP
scret 9  (predict for NP_177343.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G71980 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.5 AT2G20230 Tetraspanin family protein [detail] 816542
5.4 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 843979
5.2 AT3G30390 Transmembrane amino acid transporter family protein [detail] 822740
5.2 AT2G48000 Pentatricopeptide repeat (PPR) superfamily protein [detail] 819412
5.1 BBX21 salt tolerance homolog2 [detail] 843890
Coexpressed
gene list		 [Coexpressed gene list for AT1G71980]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260168_at
260168_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260168_at
260168_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260168_at
260168_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843529      
Refseq ID (protein) NP_177343.2 


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