ATTED-II : GeneID search result

[←][→] ath At1g71980 Gene

functional annotation

Function

Protease-associated (PA) RING/U-box zinc finger family protein

GO BP

GO CC

GO:0000326 [list] [network] protein storage vacuole	(13 genes)	IDA
GO:0000139 [list] [network] Golgi membrane	(37 genes)	IDA
GO:0005802 [list] [network] trans-Golgi network	(268 genes)	IDA
GO:0005634 [list] [network] nucleus	(10305 genes)	ISM

GO MF

GO:0005515 [list] [network] protein binding

(5066 genes)

IPI

KEGG

Protein

NP_177343.2

BLAST

NP_177343.2

Orthologous

[Ortholog page] AT1G35630 (ath) LOC4331745 (osa) LOC4344437 (osa) LOC7475798 (ppo) LOC18104444 (ppo) LOC25484985 (mtr) LOC100791248 (gma) LOC100793048 (gma) LOC101248068 (sly) LOC101252295 (sly) LOC103831712 (bra) LOC123047594 (tae) LOC123055402 (tae) LOC123147664 (tae) LOC123156774 (tae) LOC123165131 (tae) LOC123191216 (tae) LOC123407680 (hvu) LOC123428544 (hvu)

Subcellular
localization
wolf

golg 2, golg_plas 2, chlo 2, plas 1, vacu 1, E.R. 1, chlo_mito 1, E.R._vacu 1

(predict for NP_177343.2)

Subcellular
localization
TargetP

scret 9

(predict for NP_177343.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G71980 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
5.6	AT3G30390	Transmembrane amino acid transporter family protein	[detail]	822740
5.3	AT4G35870	early-responsive to dehydration stress protein (ERD4)	[detail]	829741
5.1	AT2G20230	Tetraspanin family protein	[detail]	816542
5.0	BBX21	salt tolerance homolog2	[detail]	843890

Coexpressed
gene list

[Coexpressed gene list for AT1G71980]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

260168_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

260168_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

260168_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	843529
Refseq ID (protein)	NP_177343.2

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