[][] ath   AT1G72790 Gene
functional annotation
Function   hydroxyproline-rich glycoprotein family protein
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
KEGG
Protein NP_177422.1 
BLAST NP_177422.1 
Orthologous [Ortholog page] AT5G57070 (ath)LOC4324204 (osa)LOC11418916 (mtr)LOC11425770 (mtr)LOC25486437 (mtr)LOC100261010 (vvi)LOC100799093 (gma)LOC100804824 (gma)LOC100811539 (gma)LOC100814577 (gma)LOC101260449 (sly)LOC103651530 (zma)LOC103830779 (bra)LOC103831783 (bra)LOC103845144 (bra)LOC103851789 (bra)LOC104646528 (sly)LOC104880208 (vvi)LOC111589982 (zma)
Subcellular
localization
wolf
nucl 7,  plas 2  (predict for NP_177422.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for NP_177422.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G72790 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.7 AT3G23750 Leucine-rich repeat protein kinase family protein [detail] 821957
5.4 AT1G17620 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [detail] 838339
5.4 LRX3 Leucine-rich repeat (LRR) family protein [detail] 826964
Coexpressed
gene list
[Coexpressed gene list for AT1G72790]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259915_at
259915_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259915_at
259915_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
259915_at
259915_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 843610    
Refseq ID (protein) NP_177422.1 


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