[←][→] ath   At1g74040 Gene
functional annotation
Function   2-isopropylmalate synthase 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009098 [list] [network] leucine biosynthetic process  (14 genes)  IDA IGI  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0003852 [list] [network] 2-isopropylmalate synthase activity  (4 genes)  IDA IGI ISS  
KEGG ath00290 [list] [network] Valine, leucine and isoleucine biosynthesis (21 genes)
ath00620 [list] [network] Pyruvate metabolism (97 genes)
ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (74 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
Protein NP_001322762.1  NP_001322763.1  NP_177544.1 
BLAST NP_001322762.1  NP_001322763.1  NP_177544.1 
Orthologous [Ortholog page] N-56 (gma)  MAML-4 (ath)  LOC4349745 (osa)  LOC4351460 (osa)  LOC7486329 (ppo)  LOC11445801 (mtr)  LOC25497889 (mtr)  LOC100778148 (gma)  LOC100788955 (gma)  LOC100807538 (gma)  LOC100812918 (gma)  LOC101245066 (sly)  IPMS2 (sly)  LOC101252796 (sly)  LOC103842698 (bra)  LOC103872613 (bra)  LOC104648641 (sly)  LOC123103026 (tae)  LOC123111229 (tae)  LOC123120301 (tae)  LOC123151239 (tae)  LOC123452967 (hvu) 
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for NP_001322762.1)
chlo 7,  mito 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001322763.1)
chlo 9,  nucl 1,  mito 1  (predict for NP_177544.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001322762.1)
chlo 9  (predict for NP_001322763.1)
chlo 9  (predict for NP_177544.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01210 2-Oxocarboxylic acid metabolism 4
ath01230 Biosynthesis of amino acids 4
ath00970 Aminoacyl-tRNA biosynthesis 3
ath00290 Valine, leucine and isoleucine biosynthesis 3
ath00620 Pyruvate metabolism 2
Genes directly connected with IMS1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.2 AT2G13440 glucose-inhibited division family A protein [detail] 815830
8.3 MAML-4 methylthioalkylmalate synthase-like 4 [detail] 838431
7.7 AT3G58140 phenylalanyl-tRNA synthetase class IIc family protein [detail] 824983
7.7 ARC6 Chaperone DnaJ-domain superfamily protein [detail] 834255
7.6 AT1G60230 Radical SAM superfamily protein [detail] 842318
7.0 ABCB25 ABC transporter of the mitochondrion 3 [detail] 835939
Coexpressed
gene list		 [Coexpressed gene list for IMS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260384_at
260384_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260384_at
260384_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260384_at
260384_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843742      
Refseq ID (protein) NP_001322762.1 
NP_001322763.1 
NP_177544.1 


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