[][] ath   AT1G74040 Gene
functional annotation
Function   2-isopropylmalate synthase 1
GO BP
GO:0009098 [list] [network] leucine biosynthetic process  (16 genes)  IBA IDA IEA IGI  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IBA IDA ISM  
GO MF
GO:0003852 [list] [network] 2-isopropylmalate synthase activity  (4 genes)  IBA IDA IGI ISS  
GO:0016829 [list] [network] lyase activity  (412 genes)  IEA  
KEGG ath00290 [list] [network] Valine, leucine and isoleucine biosynthesis (22 genes)
ath00620 [list] [network] Pyruvate metabolism (86 genes)
ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (74 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_001322762.1  NP_001322763.1  NP_177544.1 
BLAST NP_001322762.1  NP_001322763.1  NP_177544.1 
Orthologous [Ortholog page] N-56 (gma)MAML-4 (ath)LOC4349745 (osa)LOC4351460 (osa)LOC7486329 (ppo)LOC11445801 (mtr)LOC25497889 (mtr)LOC100249820 (vvi)LOC100280189 (zma)LOC100280499 (zma)LOC100281571 (zma)LOC100778148 (gma)LOC100788955 (gma)LOC100807538 (gma)LOC100812918 (gma)LOC101245066 (sly)IPMS2 (sly)LOC103842698 (bra)LOC103872613 (bra)
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for NP_001322762.1)
chlo 7,  mito 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001322763.1)
chlo 9,  nucl 1,  mito 1  (predict for NP_177544.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001322762.1)
chlo 9  (predict for NP_001322763.1)
chlo 9  (predict for NP_177544.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 7
ath00290 Valine, leucine and isoleucine biosynthesis 2
ath00620 Pyruvate metabolism 2
ath01210 2-Oxocarboxylic acid metabolism 2
ath00300 Lysine biosynthesis 2
Genes directly connected with IMS1 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.7 MAML-4 methylthioalkylmalate synthase-like 4 [detail] 838431
7.1 AT2G13440 glucose-inhibited division family A protein [detail] 815830
6.8 ARC6 Chaperone DnaJ-domain superfamily protein [detail] 834255
Coexpressed
gene list
[Coexpressed gene list for IMS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260384_at
260384_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260384_at
260384_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
260384_at
260384_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 843742    
Refseq ID (protein) NP_001322762.1 
NP_001322763.1 
NP_177544.1 


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