[][] ath   AT1G75780 Gene
functional annotation
Function   tubulin beta-1 chain
GO BP
GO:0000226 [list] [network] microtubule cytoskeleton organization  (134 genes)  IBA  
GO:0007017 [list] [network] microtubule-based process  (183 genes)  IBA  
GO:0000278 [list] [network] mitotic cell cycle  (198 genes)  IBA  
GO:0009826 [list] [network] unidimensional cell growth  (279 genes)  IEP  
GO:0009416 [list] [network] response to light stimulus  (700 genes)  IEP  
GO CC
GO:0005874 [list] [network] microtubule  (186 genes)  IBA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA ISM  
GO MF
GO:0005200 [list] [network] structural constituent of cytoskeleton  (30 genes)  IBA  
GO:0003924 [list] [network] GTPase activity  (169 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (248 genes)  IBA  
KEGG ath04145 [list] [network] Phagosome (82 genes)
Protein NP_177706.1 
BLAST NP_177706.1 
Orthologous [Ortholog page] LOC542239 (zma)LOC542380 (zma)LOC542416 (zma)LOC542417 (zma)LOC542418 (zma)LOC542705 (zma)TUBB3 (gma)TUBB (gma)TUB (sly)TUB7 (ath)TUB9 (ath)TUB6 (ath)TUB8 (ath)TUB4 (ath)TUB2 (ath)TUB3 (ath)TUB5 (ath)LOC4326917 (osa)LOC4327550 (osa)LOC4328420 (osa)LOC4331315 (osa)LOC4333632 (osa)LOC4334309 (osa)LOC4338790 (osa)LOC4341810 (osa)LOC7464075 (ppo)LOC7465852 (ppo)LOC7465861 (ppo)LOC7471684 (ppo)LOC7472769 (ppo)LOC7477677 (ppo)LOC7479116 (ppo)LOC7479658 (ppo)LOC7481503 (ppo)LOC7486729 (ppo)LOC11414871 (mtr)LOC11415767 (mtr)LOC11422693 (mtr)LOC11425110 (mtr)LOC11437601 (mtr)LOC11438618 (mtr)LOC11439086 (mtr)LOC11442516 (mtr)LOC25491473 (mtr)LOC25493371 (mtr)LOC100244399 (vvi)LOC100244729 (vvi)LOC100247828 (vvi)LOC100258042 (vvi)LOC100259087 (vvi)LOC100259401 (vvi)LOC100259534 (vvi)LOC100260443 (vvi)LOC100261736 (vvi)LOC100265052 (vvi)LOC100272336 (zma)LOC100273658 (zma)LOC100382290 (zma)LOC100383576 (zma)LOC100502086 (zma)TUBB1 (gma)LOC100781043 (gma)LOC100781525 (gma)LOC100784236 (gma)LOC100788253 (gma)LOC100793406 (gma)LOC100797652 (gma)LOC100797894 (gma)LOC100798849 (gma)LOC100801608 (gma)TUBB2 (gma)LOC100816898 (gma)LOC100818878 (gma)LOC100819408 (gma)LOC100819883 (gma)LOC101246411 (sly)LOC101248630 (sly)LOC101248956 (sly)LOC101251552 (sly)LOC101252240 (sly)LOC101253952 (sly)LOC101262621 (sly)LOC101262728 (sly)LOC101265829 (sly)LOC103625832 (zma)LOC103629648 (zma)LOC103827910 (bra)LOC103832026 (bra)LOC103834176 (bra)LOC103839187 (bra)LOC103846653 (bra)LOC103848440 (bra)LOC103858467 (bra)LOC103861207 (bra)LOC103864974 (bra)LOC103867806 (bra)LOC103868027 (bra)LOC103873285 (bra)LOC103873591 (bra)LOC103873913 (bra)LOC103874246 (bra)LOC103874709 (bra)
Subcellular
localization
wolf
nucl 6,  cyto 3,  nucl_plas 3  (predict for NP_177706.1)
Subcellular
localization
TargetP
other 8  (predict for NP_177706.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 4
Genes directly connected with TUB1 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.3 UDG4 UDP-glucose 6-dehydrogenase family protein [detail] 833928
7.3 XTH8 xyloglucan endotransglucosylase/hydrolase 8 [detail] 837698
6.7 TUB6 beta-6 tubulin [detail] 831100
5.9 AT3G43960 Cysteine proteinases superfamily protein [detail] 823513
5.5 PLAT2 Lipase/lipooxygenase, PLAT/LH2 family protein [detail] 816751
5.5 AT3G16180 Major facilitator superfamily protein [detail] 820864
5.3 BGAL5 beta-galactosidase 5 [detail] 841080
4.6 AT2G38090 Duplicated homeodomain-like superfamily protein [detail] 818387
Coexpressed
gene list
[Coexpressed gene list for TUB1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262978_at
262978_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262978_at
262978_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
262978_at
262978_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 843911    
Refseq ID (protein) NP_177706.1 


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