[←][→] ath   AT1G75950 Gene
functional annotation
Function   S phase kinase-associated protein 1  
GO BP
GO:0045910 [list] [network] negative regulation of DNA recombination  (18 genes)  IMP  
GO:0007140 [list] [network] male meiotic nuclear division  (25 genes)  IMP  
GO:0016032 [list] [network] viral process  (63 genes)  IEA  
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (66 genes)  IBA  
GO:0007059 [list] [network] chromosome segregation  (108 genes)  IEA  
GO:0000226 [list] [network] microtubule cytoskeleton organization  (134 genes)  IMP  
GO:0009873 [list] [network] ethylene-activated signaling pathway  (191 genes)  IEA  
GO:0009734 [list] [network] auxin-activated signaling pathway  (196 genes)  IEA  
GO:0000278 [list] [network] mitotic cell cycle  (198 genes)  TAS  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  TAS  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (68 genes)  NAS  
GO:0005819 [list] [network] spindle  (82 genes)  IDA  
GO:0009524 [list] [network] phragmoplast  (89 genes)  IDA  
GO:0000151 [list] [network] ubiquitin ligase complex  (277 genes)  TAS  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA NAS  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA ISM NAS  
GO MF
GO:0097602 [list] [network] cullin family protein binding  (25 genes)  IBA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_565123.1 
BLAST NP_565123.1 
Orthologous [Ortholog page] SK14 (ath)  SK16 (ath)  MEO (ath)  SK3 (ath)  SK15 (ath)  AT5G42190 (ath)  SK18 (ath)  SK4 (ath)  LOC4347721 (osa)  LOC7470408 (ppo)  LOC7485611 (ppo)  LOC7496912 (ppo)  LOC9270098 (osa)  LOC11429415 (mtr)  LOC11429668 (mtr)  LOC11430287 (mtr)  LOC11433393 (mtr)  LOC11438280 (mtr)  LOC11445600 (mtr)  LOC25490092 (mtr)  LOC25499058 (mtr)  LOC25499060 (mtr)  LOC25499062 (mtr)  LOC25499072 (mtr)  LOC100193107 (zma)  LOC100252349 (vvi)  LOC100306458 (gma)  LOC100527683 (gma)  LOC100798104 (gma)  LOC100809769 (gma)  LOC101243954 (sly)  LOC101246287 (sly)  LOC101246572 (sly)  LOC101246871 (sly)  LOC101268040 (sly)  SKP1 (sly)  LOC103830630 (bra)  LOC103832041 (bra)  LOC103848439 (bra)  LOC103852996 (bra)  LOC103872814 (bra) 
Subcellular
localization
wolf
cyto 4,  mito 4,  pero 2  (predict for NP_565123.1)
Subcellular
localization
TargetP
other 7,  scret 5  (predict for NP_565123.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 6
ath03050 Proteasome 3
ath04120 Ubiquitin mediated proteolysis 2
ath03420 Nucleotide excision repair 2
Genes directly connected with SKP1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 AT5G16470 zinc finger (C2H2 type) family protein [detail] 831508
7.5 RAD23D Rad23 UV excision repair protein family [detail] 833835
7.3 AT5G65495 hypothetical protein [detail] 836675
6.9 AT2G23090 Uncharacterized protein family SERF [detail] 816839
6.8 RBX1 RING-box 1 [detail] 832179
6.4 ILR3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 835557
Coexpressed
gene list		 [Coexpressed gene list for SKP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262676_at
262676_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262676_at
262676_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262676_at
262676_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843928      
Refseq ID (protein) NP_565123.1 


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