[←][→] ath   At1g75950 Gene
functional annotation
Function   S phase kinase-associated protein 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0045910 [list] [network] negative regulation of DNA recombination  (10 genes)  IMP  
GO:0007140 [list] [network] male meiotic nuclear division  (28 genes)  IMP  
GO:0000278 [list] [network] mitotic cell cycle  (86 genes)  TAS  
GO:0000226 [list] [network] microtubule cytoskeleton organization  (106 genes)  IMP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (230 genes)  TAS  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (41 genes)  NAS  
GO:0005819 [list] [network] spindle  (53 genes)  IDA  
GO:0009524 [list] [network] phragmoplast  (69 genes)  IDA  
GO:0000151 [list] [network] ubiquitin ligase complex  (189 genes)  TAS  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA NAS  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM NAS  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (155 genes)
ath04141 [list] [network] Protein processing in endoplasmic reticulum (215 genes)
Protein NP_565123.1 
BLAST NP_565123.1 
Orthologous [Ortholog page] LOC543011 (tae)  LOC543111 (tae)  SK19 (ath)  SK14 (ath)  SK16 (ath)  MEO (ath)  SK3 (ath)  SK9 (ath)  SK15 (ath)  SK13 (ath)  SK11 (ath)  SK12 (ath)  AT5G42190 (ath)  SK18 (ath)  SK4 (ath)  LOC4346586 (osa)  LOC4346592 (osa)  LOC4347721 (osa)  LOC7458055 (ppo)  LOC7470408 (ppo)  LOC7485611 (ppo)  LOC7494241 (ppo)  LOC7496912 (ppo)  LOC9270098 (osa)  LOC11418787 (mtr)  LOC11429415 (mtr)  LOC11429668 (mtr)  LOC11430287 (mtr)  LOC11433393 (mtr)  LOC11438280 (mtr)  LOC11445600 (mtr)  LOC18099152 (ppo)  LOC25490092 (mtr)  LOC25499058 (mtr)  LOC25499060 (mtr)  LOC25499062 (mtr)  LOC25499072 (mtr)  LOC100306458 (gma)  LOC100527683 (gma)  LOC100798104 (gma)  LOC100809769 (gma)  LOC101243954 (sly)  LOC101246287 (sly)  LOC101246572 (sly)  LOC101246871 (sly)  LOC101268040 (sly)  SKP1 (sly)  LOC103830630 (bra)  LOC103832041 (bra)  LOC103848439 (bra)  LOC103852996 (bra)  LOC103871442 (bra)  LOC103872814 (bra)  LOC107275506 (osa)  LOC107275695 (osa)  LOC123049837 (tae)  LOC123050631 (tae)  LOC123050632 (tae)  LOC123055202 (tae)  LOC123055203 (tae)  LOC123059483 (tae)  LOC123064382 (tae)  LOC123064837 (tae)  LOC123073647 (tae)  LOC123073992 (tae)  LOC123082825 (tae)  LOC123104620 (tae)  LOC123106701 (tae)  LOC123112888 (tae)  LOC123115842 (tae)  LOC123122399 (tae)  LOC123124461 (tae)  LOC123125912 (tae)  LOC123149828 (tae)  LOC123154852 (tae)  LOC123165315 (tae)  LOC123168476 (tae)  LOC123397621 (hvu)  LOC123399112 (hvu)  LOC123399113 (hvu)  LOC123399118 (hvu)  LOC123406004 (hvu)  LOC123410115 (hvu)  LOC123410390 (hvu)  LOC123411148 (hvu)  LOC123411201 (hvu)  LOC123411539 (hvu)  LOC123412940 (hvu)  LOC123412991 (hvu)  LOC123412992 (hvu)  LOC123412993 (hvu)  LOC123412994 (hvu)  LOC123431082 (hvu)  LOC123440609 (hvu)  LOC123441300 (hvu) 
Subcellular
localization
wolf
cyto 4,  mito 4,  pero 2  (predict for NP_565123.1)
Subcellular
localization
TargetP
other 7,  scret 5  (predict for NP_565123.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 4
ath03050 Proteasome 3
ath04120 Ubiquitin mediated proteolysis 2
ath03420 Nucleotide excision repair 2
Genes directly connected with SKP1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.2 AT5G16470 zinc finger (C2H2 type) family protein [detail] 831508
7.9 RAD23D Rad23 UV excision repair protein family [detail] 833835
7.8 RBX1 RING-box 1 [detail] 832179
7.0 ILR3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 835557
5.8 ISU1 SufE/NifU family protein [detail] 828316
4.7 AT5G24610 cyclic AMP-responsive element-binding protein [detail] 832532
Coexpressed
gene list		 [Coexpressed gene list for SKP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262676_at
262676_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262676_at
262676_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262676_at
262676_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843928      
Refseq ID (protein) NP_565123.1 


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