[←][→] ath   At1g76120 Gene
functional annotation
Function   Pseudouridine synthase family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0009982 [list] [network] pseudouridine synthase activity  (19 genes)  TAS  
KEGG
Protein NP_565126.1  NP_974152.1 
BLAST NP_565126.1  NP_974152.1 
Orthologous [Ortholog page] AT1G20370 (ath)  LOC4330262 (osa)  LOC7485628 (ppo)  LOC7490609 (ppo)  LOC11440088 (mtr)  LOC11442694 (mtr)  LOC100778978 (gma)  LOC100811976 (gma)  LOC101250299 (sly)  LOC103832059 (bra)  LOC103872832 (bra)  LOC123127959 (tae)  LOC123137671 (tae)  LOC123145056 (tae)  LOC123401341 (hvu) 
Subcellular
localization
wolf
cyto 4,  cysk 3,  cyto_nucl 3,  nucl 3  (predict for NP_565126.1)
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_974152.1)
Subcellular
localization
TargetP
other 9  (predict for NP_565126.1)
other 9  (predict for NP_974152.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G76120 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.1 AT3G26850 histone-lysine N-methyltransferase [detail] 822300
8.4 AT4G02820 Pentatricopeptide repeat (PPR) superfamily protein [detail] 828169
7.6 PPR40 pentatricopeptide (PPR) domain protein 40 [detail] 820944
7.1 AT5G64320 Pentatricopeptide repeat (PPR) superfamily protein [detail] 836553
Coexpressed
gene list		 [Coexpressed gene list for AT1G76120]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261750_at
261750_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261750_at
261750_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261750_at
261750_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843944      
Refseq ID (protein) NP_565126.1 
NP_974152.1 


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