| functional annotation |
| Function |
Photosystem II reaction center PsbP family protein |
|
| GO BP |
|
GO:0015994 [list] [network] chlorophyll metabolic process
|
(122 genes)
|
IEA
|
 |
|
GO:0015979 [list] [network] photosynthesis
|
(167 genes)
|
IEA
|
|
|
GO:0042440 [list] [network] pigment metabolic process
|
(230 genes)
|
IEA
|
|
|
GO:0008610 [list] [network] lipid biosynthetic process
|
(657 genes)
|
IEA
|
|
|
GO:0044255 [list] [network] cellular lipid metabolic process
|
(822 genes)
|
IEA
|
|
|
GO:0009416 [list] [network] response to light stimulus
|
(1981 genes)
|
IEA
|
|
|
| GO CC |
|
GO:0009654 [list] [network] photosystem II oxygen evolving complex
|
(19 genes)
|
IEA
|
|
|
GO:0019898 [list] [network] extrinsic component of membrane
|
(46 genes)
|
IEA
|
|
|
GO:0009543 [list] [network] chloroplast thylakoid lumen
|
(50 genes)
|
HDA
|
|
|
GO:0031977 [list] [network] thylakoid lumen
|
(67 genes)
|
HDA
|
|
|
GO:0009535 [list] [network] chloroplast thylakoid membrane
|
(315 genes)
|
HDA
|
|
|
GO:0009579 [list] [network] thylakoid
|
(509 genes)
|
HDA
|
|
|
GO:0005739 [list] [network] mitochondrion
|
(4228 genes)
|
HDA
|
|
|
GO:0009507 [list] [network] chloroplast
|
(5004 genes)
|
HDA
ISM
|
|
|
| GO MF |
|
GO:0005509 [list] [network] calcium ion binding
|
(132 genes)
|
IEA
|
|
|
| KEGG |
|
|
| Protein |
NP_565131.1
|
| BLAST |
NP_565131.1
|
| Orthologous |
[Ortholog page]
LOC4346015 (osa)
LOC7494726 (ppo)
LOC11418216 (mtr)
LOC100785276 (gma)
LOC100805637 (gma)
LOC101247415 (sly)
LOC103832108 (bra)
LOC123408797 (hvu)
|
Subcellular
localization
wolf |
|
chlo 6,
nucl 1,
cyto_nucl 1,
cyto 1,
mito 1,
plas 1,
mito_plas 1
|
(predict for NP_565131.1)
|
|
Subcellular
localization
TargetP |
|
chlo 8
|
(predict for NP_565131.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath00710 |
Carbon fixation in photosynthetic organisms |
2 |
 |
| ath01200 |
Carbon metabolism |
2 |
 |
Genes directly connected with AT1G76450 on the network
| coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
| 9.0 |
EDA3 |
DnaJ/Hsp40 cysteine-rich domain superfamily protein |
[detail] |
818051 |
| 7.6 |
ZKT |
protein containing PDZ domain, a K-box domain, and a TPR region |
[detail] |
841995 |
| 7.4 |
AT4G02530 |
chloroplast thylakoid lumen protein |
[detail] |
827927 |
| 7.1 |
AT4G34090 |
cyclin delta-3 |
[detail] |
829555 |
| 7.0 |
AT5G48790 |
LOW PSII ACCUMULATION protein (DUF1995) |
[detail] |
834937 |
| 6.7 |
AT2G46910 |
Plastid-lipid associated protein PAP / fibrillin family protein |
[detail] |
819304 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT1G76450]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
259981_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
259981_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
259981_at
X axis is samples (xls file), and Y axis is log-expression.
|
At1g76450 Gene
