ATTED-II : GeneID search result

[←][→] ath At1g76650 Gene

functional annotation

Function

calmodulin-like 38

GO BP

GO:1900459 [list] [network] positive regulation of brassinosteroid mediated signaling pathway	(9 genes)	IGI
GO:0042128 [list] [network] nitrate assimilation	(14 genes)	IMP
GO:0071456 [list] [network] cellular response to hypoxia	(241 genes)	HEP
GO:0001666 [list] [network] response to hypoxia	(325 genes)	IMP
GO:0009611 [list] [network] response to wounding	(816 genes)	IEP

GO CC

GO:0010494 [list] [network] cytoplasmic stress granule	(28 genes)	IDA
GO:0005886 [list] [network] plasma membrane	(2529 genes)	IDA
GO:0005634 [list] [network] nucleus	(10305 genes)	IDA ISM
GO:0005737 [list] [network] cytoplasm	(13880 genes)	IDA

GO MF

GO:0005102 [list] [network] signaling receptor binding	(112 genes)	IPI
GO:0005509 [list] [network] calcium ion binding	(132 genes)	IDA
GO:0005515 [list] [network] protein binding	(5066 genes)	IPI

KEGG

ath04626 [list] [network] Plant-pathogen interaction (204 genes)

Protein

NP_001077834.1 NP_001185413.1 NP_177791.1

BLAST

NP_001077834.1 NP_001185413.1 NP_177791.1

Orthologous

[Ortholog page] LOC543942 (sly) AT3G01830 (ath) CML41 (ath) CML37 (ath) AT1G76640 (ath) LOC4325408 (osa) LOC7474533 (ppo) LOC7478001 (ppo) LOC7479123 (ppo) LOC11406648 (mtr) LOC11422542 (mtr) LOC18109924 (ppo) LOC100306370 (gma) LOC100500092 (gma) LOC100526852 (gma) LOC100775336 (gma) LOC100805239 (gma) LOC101253669 (sly) LOC101257927 (sly) LOC101267202 (sly) LOC103830603 (bra) LOC103832125 (bra) LOC103832126 (bra) LOC103838742 (bra) LOC103853037 (bra) LOC103853038 (bra) LOC103858885 (bra) LOC103860666 (bra) LOC107277351 (osa) LOC107277511 (osa) LOC111240476 (gma) LOC112323374 (ppo) LOC112325860 (ppo) LOC120576863 (mtr) LOC123058616 (tae) LOC123058617 (tae) LOC123059419 (tae) LOC123059420 (tae) LOC123059421 (tae) LOC123059422 (tae) LOC123059423 (tae) LOC123059424 (tae) LOC123063477 (tae) LOC123065724 (tae) LOC123066711 (tae) LOC123066721 (tae) LOC123066723 (tae) LOC123066724 (tae) LOC123066725 (tae) LOC123070910 (tae) LOC123074797 (tae) LOC123074804 (tae) LOC123074806 (tae) LOC123075725 (tae) LOC123075728 (tae) LOC123075730 (tae) LOC123075731 (tae) LOC123075732 (tae) LOC123075734 (tae) LOC123079297 (tae) LOC123094700 (tae) LOC123396799 (hvu) LOC123396861 (hvu) LOC123416216 (hvu) LOC123440987 (hvu) LOC123440989 (hvu) LOC123440991 (hvu) LOC123440992 (hvu) LOC123444513 (hvu)

Subcellular
localization
wolf

nucl 5, chlo 4, extr 1	(predict for NP_001077834.1)
nucl 5, chlo 4, mito 1, extr 1	(predict for NP_001185413.1)
nucl 5, chlo 4, mito 1, extr 1	(predict for NP_177791.1)

Subcellular
localization
TargetP

chlo 3, other 3, mito 3	(predict for NP_001077834.1)
chlo 3, mito 3, other 3	(predict for NP_001185413.1)
chlo 3, mito 3, other 3	(predict for NP_177791.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	3

Genes directly connected with CML38 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
9.2	SRO5	uncharacterized protein	[detail]	836372
8.7	WRKY40	WRKY DNA-binding protein 40	[detail]	844423
8.0	AT4G24110	NADP-specific glutamate dehydrogenase	[detail]	828511
6.1	BPS3	BPS1-like protein	[detail]	827971

Coexpressed
gene list

[Coexpressed gene list for CML38]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

259879_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

259879_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

259879_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	843998
Refseq ID (protein)	NP_001077834.1
	NP_001185413.1
	NP_177791.1

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