[←][→] ath   AT1G77440 Gene
functional annotation
Function   20S proteasome beta subunit C2  
GO BP
GO:0010499 [list] [network] proteasomal ubiquitin-independent protein catabolic process  (18 genes)  IBA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (188 genes)  IBA  
GO:0010498 [list] [network] proteasomal protein catabolic process  (203 genes)  IBA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  TAS  
GO CC
GO:0005839 [list] [network] proteasome core complex  (24 genes)  IBA TAS  
GO:0000502 [list] [network] proteasome complex  (80 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0004298 [list] [network] threonine-type endopeptidase activity  (23 genes)  IEA  
GO:0004175 [list] [network] endopeptidase activity  (308 genes)  IBA  
KEGG ath03050 [list] [network] Proteasome (60 genes)
Protein NP_001031294.1  NP_565156.1 
BLAST NP_001031294.1  NP_565156.1 
Orthologous [Ortholog page] PBC1 (ath)  LOC4328517 (osa)  LOC4341637 (osa)  LOC7460354 (ppo)  LOC7460968 (ppo)  LOC11417396 (mtr)  LOC11445740 (mtr)  LOC100250625 (vvi)  LOC100272320 (zma)  LOC100274112 (zma)  LOC100306084 (gma)  LOC100382784 (zma)  LOC100499664 (gma)  LOC100527027 (gma)  LOC101259528 (sly)  LOC103829368 (bra)  LOC103835733 (bra)  LOC103837936 (bra)  LOC103853073 (bra)  LOC103873015 (bra) 
Subcellular
localization
wolf
cyto 5,  chlo 3,  nucl 1,  chlo_mito 1  (predict for NP_001031294.1)
cyto 5,  chlo 3,  nucl 1,  chlo_mito 1  (predict for NP_565156.1)
Subcellular
localization
TargetP
scret 7,  other 3  (predict for NP_001031294.1)
scret 7,  other 3  (predict for NP_565156.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 17
Genes directly connected with PBC2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.0 PBC1 proteasome beta subunit C1 [detail] 838776
9.5 RPN12a regulatory particle non-ATPase 12A [detail] 842760
8.9 PAG1 20S proteasome alpha subunit G1 [detail] 817244
6.6 AT3G25545 trigger factor [detail] 822141
6.2 AT4G25550 Cleavage/polyadenylation specificity factor, 25kDa subunit [detail] 828660
Coexpressed
gene list		 [Coexpressed gene list for PBC2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259712_at
259712_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259712_at
259712_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259712_at
259712_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844080      
Refseq ID (protein) NP_001031294.1 
NP_565156.1 


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