[←][→] ath   At1g78240 Gene
functional annotation
Function   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010289 [list] [network] homogalacturonan biosynthetic process  (3 genes)  IMP  
GO:0009735 [list] [network] response to cytokinin  (123 genes)  IMP  
GO:0048364 [list] [network] root development  (1192 genes)  IMP  
GO:0048367 [list] [network] shoot system development  (1318 genes)  IMP  
GO CC
GO:0000138 [list] [network] Golgi trans cisterna  (86 genes)  HDA  
GO:0005802 [list] [network] trans-Golgi network  (268 genes)  HDA  
GO:0005768 [list] [network] endosome  (350 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  HDA IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0008168 [list] [network] methyltransferase activity  (136 genes)  IMP  
KEGG
Protein NP_001154475.1  NP_177948.3 
BLAST NP_001154475.1  NP_177948.3 
Orthologous [Ortholog page] LOC4330770 (osa)  LOC7461783 (ppo)  LOC7486593 (ppo)  LOC11436118 (mtr)  LOC25489477 (mtr)  LOC100787635 (gma)  LOC100795712 (gma)  LOC100805992 (gma)  LOC100812530 (gma)  LOC101257558 (sly)  LOC103830533 (bra)  LOC103832308 (bra)  LOC103853118 (bra)  LOC123128467 (tae)  LOC123138347 (tae)  LOC123145590 (tae)  LOC123404113 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 3,  plas 2,  chlo_mito 2  (predict for NP_001154475.1)
chlo 4,  nucl 3,  plas 2,  chlo_mito 2  (predict for NP_177948.3)
Subcellular
localization
TargetP
other 5  (predict for NP_001154475.1)
other 5  (predict for NP_177948.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
Genes directly connected with TSD2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.7 GAUT9 galacturonosyltransferase 9 [detail] 820474
6.2 AT1G04430 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 839522
6.1 AT4G18030 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 827528
6.0 GAUT15 galacturonosyltransferase 15 [detail] 825048
Coexpressed
gene list		 [Coexpressed gene list for TSD2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260800_at
260800_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260800_at
260800_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260800_at
260800_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844160      
Refseq ID (protein) NP_001154475.1 
NP_177948.3 


The preparation time of this page was 0.2 [sec].