[←][→] ath   At1g78260 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010114 [list] [network] response to red light  (101 genes)  IEA  
GO:0090558 [list] [network] plant epidermis development  (635 genes)  IEA  
GO:0010015 [list] [network] root morphogenesis  (669 genes)  IEA  
GO:0048589 [list] [network] developmental growth  (1060 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG
Protein NP_565175.1  NP_974169.1 
BLAST NP_565175.1  NP_974169.1 
Orthologous [Ortholog page] AT1G22330 (ath)  LOC4330772 (osa)  LOC4340517 (osa)  LOC7461784 (ppo)  LOC11430239 (mtr)  LOC100787086 (gma)  LOC100788516 (gma)  LOC100794651 (gma)  LOC100811977 (gma)  LOC101258063 (sly)  LOC103829336 (bra)  LOC103830531 (bra)  LOC103832309 (bra)  LOC103869055 (bra)  LOC123128463 (tae)  LOC123138340 (tae)  LOC123145586 (tae)  LOC123152643 (tae)  LOC123162061 (tae)  LOC123169800 (tae)  LOC123403375 (hvu)  LOC123412021 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_565175.1)
nucl 10  (predict for NP_974169.1)
Subcellular
localization
TargetP
other 8  (predict for NP_565175.1)
other 8  (predict for NP_974169.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G78260 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.1 AT1G22330 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 838839
6.7 AT2G46780 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 819291
6.2 F8H glucuronoxylan glucuronosyltransferase, putative [detail] 832358
Coexpressed
gene list		 [Coexpressed gene list for AT1G78260]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260806_at
260806_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260806_at
260806_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260806_at
260806_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844161      
Refseq ID (protein) NP_565175.1 
NP_974169.1 


The preparation time of this page was 0.7 [sec].