ATTED-II : GeneID search result

[←][→] ath AT1G78290 Gene

functional annotation

Function

Protein kinase superfamily protein

GO BP

GO:0080167 [list] [network] response to karrikin	(128 genes)	IEP
GO:0035556 [list] [network] intracellular signal transduction	(517 genes)	IBA
GO:0006970 [list] [network] response to osmotic stress	(563 genes)	IGI
GO:0006468 [list] [network] protein phosphorylation	(921 genes)	IBA

GO CC

GO:0005634 [list] [network] nucleus	(10793 genes)	IBA IDA
GO:0005737 [list] [network] cytoplasm	(14855 genes)	IBA IDA

GO MF

GO:0004674 [list] [network] protein serine/threonine kinase activity	(801 genes)	IBA
GO:0005524 [list] [network] ATP binding	(2003 genes)	IEA

KEGG

ath04016 [list] [network] MAPK signaling pathway - plant (134 genes)

ath04075 [list] [network] Plant hormone signal transduction (273 genes)

Protein

NP_001077839.1 NP_974170.1

BLAST

NP_001077839.1 NP_974170.1

Orthologous

[Ortholog page] SNRK2.7 (ath) LOC4333017 (osa) LOC4343944 (osa) LOC4349411 (osa) LOC7486581 (ppo) LOC11432123 (mtr) LOC25489677 (mtr) LOC25493584 (mtr) LOC25501875 (mtr) SRK2C (sly) LOC100192497 (zma) LOC100216611 (zma) LOC100232851 (vvi) LOC100243594 (vvi) LOC100260262 (vvi) LOC100281258 (zma) LOC100782714 (gma) LOC100788662 (gma) LOC100793276 (gma) LOC100798091 (gma) LOC100807981 (gma) LOC100817713 (gma) LOC100853603 (vvi) LOC101250433 (sly) LOC101261086 (sly) LOC101262107 (sly) LOC103830529 (bra) LOC103854644 (bra)

Subcellular
localization
wolf

cyto 4, cysk 2, cyto_pero 2, cyto_E.R. 2	(predict for NP_001077839.1)
cyto 4, cysk 2, cyto_pero 2, cyto_E.R. 2	(predict for NP_974170.1)

Subcellular
localization
TargetP

other 9	(predict for NP_001077839.1)
other 9	(predict for NP_974170.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with SNRK2-8 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.2	AT2G41250	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[detail]	818724
5.8	SPA3	SPA1-related 3	[detail]	820767
5.0	AT2G24280	alpha/beta-Hydrolases superfamily protein	[detail]	816963
4.3	CYP71B13	cytochrome P450, family 71, subfamily B, polypeptide 13	[detail]	832585

Coexpressed
gene list

[Coexpressed gene list for SNRK2-8]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

260774_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

260774_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

260774_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	844164
Refseq ID (protein)	NP_001077839.1
Refseq ID (protein)	NP_974170.1

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