[←][→] ath   At1g78420 Gene
functional annotation
Function   RING/U-box superfamily protein      
GO BP
GO:0080113 [list] [network] regulation of seed growth  (15 genes)  IMP  
GO:0046620 [list] [network] regulation of organ growth  (19 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  IDA IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (78 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001185425.1  NP_565180.1 
BLAST NP_001185425.1  NP_565180.1 
Orthologous [Ortholog page] AT1G17145 (ath)  LOC4328856 (osa)  LOC4340173 (osa)  LOC7459113 (ppo)  LOC7471890 (ppo)  LOC25487074 (mtr)  LOC100682452 (tae)  LOC100816142 (gma)  LOC100817758 (gma)  LOC101267326 (sly)  LOC103832322 (bra)  LOC103853127 (bra)  LOC103872500 (bra)  LOC123137004 (tae)  LOC123144446 (tae)  LOC123150689 (tae)  LOC123161790 (tae)  LOC123165337 (tae)  LOC123401431 (hvu)  LOC123409464 (hvu)  LOC123448439 (hvu) 
Subcellular
localization
wolf
nucl 8,  mito 1  (predict for NP_001185425.1)
nucl 8,  mito 1  (predict for NP_565180.1)
Subcellular
localization
TargetP
other 8,  mito 5  (predict for NP_001185425.1)
other 8,  mito 5  (predict for NP_565180.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G78420 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.3 AT2G02370 SNARE associated Golgi protein family [detail] 814768
6.2 AT3G23540 alpha/beta-Hydrolases superfamily protein [detail] 821933
5.7 WRKY39 WRKY DNA-binding protein 39 [detail] 819625
5.6 AT1G50570 Calcium-dependent lipid-binding (CaLB domain) family protein [detail] 841478
5.5 AT1G77220 organic solute transporter ostalpha protein (DUF300) [detail] 844058
4.7 AT1G75400 RING/U-box superfamily protein [detail] 843876
Coexpressed
gene list		 [Coexpressed gene list for AT1G78420]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260747_at
260747_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260747_at
260747_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260747_at
260747_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844178      
Refseq ID (protein) NP_001185425.1 
NP_565180.1 


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