[←][→] ath   At1g78510 Gene
functional annotation
Function   solanesyl diphosphate synthase 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010236 [list] [network] plastoquinone biosynthetic process  (7 genes)  IMP  
GO:0006744 [list] [network] ubiquinone biosynthetic process  (14 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00900 [list] [network] Terpenoid backbone biosynthesis (61 genes)
Protein NP_001077840.1  NP_177972.2 
BLAST NP_001077840.1  NP_177972.2 
Orthologous [Ortholog page] SPS2 (ath)  LOC4351957 (osa)  LOC7459128 (ppo)  LOC9267741 (osa)  LOC25487134 (mtr)  LOC100783538 (gma)  LOC100805842 (gma)  SppS (sly)  LOC103832329 (bra)  LOC103872491 (bra)  LOC123069734 (tae)  LOC123183265 (tae)  LOC123451941 (hvu) 
Subcellular
localization
wolf
chlo 5,  mito 4  (predict for NP_001077840.1)
chlo 9  (predict for NP_177972.2)
Subcellular
localization
TargetP
mito 6  (predict for NP_001077840.1)
chlo 2  (predict for NP_177972.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
ath00053 Ascorbate and aldarate metabolism 2
ath01240 Biosynthesis of cofactors 2
Genes directly connected with SPS1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.6 AT3G56290 potassium transporter [detail] 824796
11.3 SPS2 solanesyl diphosphate synthase 2 [detail] 838275
10.2 AT1G66330 senescence-associated family protein [detail] 842950
10.2 AT1G64500 Glutaredoxin family protein [detail] 842758
9.2 SPA4 SPA1-related 4 [detail] 841743
8.3 AT5G19850 alpha/beta-Hydrolases superfamily protein [detail] 832105
8.1 VTC2 GDP-L-galactose phosphorylase 1 [detail] 828792
7.8 AT5G42760 Leucine carboxyl methyltransferase [detail] 834285
7.4 SEP2 stress enhanced protein 2 [detail] 816733
5.6 GME GDP-D-mannose 3',5'-epimerase [detail] 833002
4.7 AT2G46420 helicase with zinc finger protein [detail] 819250
Coexpressed
gene list		 [Coexpressed gene list for SPS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263122_at
263122_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263122_at
263122_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263122_at
263122_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844187      
Refseq ID (protein) NP_001077840.1 
NP_177972.2 


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