[←][→] ath   AT1G78510 Gene
functional annotation
Function   solanesyl diphosphate synthase 1  
GO BP
GO:0010236 [list] [network] plastoquinone biosynthetic process  (7 genes)  IMP  
GO:0006744 [list] [network] ubiquinone biosynthetic process  (19 genes)  IMP  
GO:0008299 [list] [network] isoprenoid biosynthetic process  (171 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IEA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  IDA  
GO MF
GO:0050347 [list] [network] trans-octaprenyltranstransferase activity  (3 genes)  IDA IGI  
GO:0052924 [list] [network] all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity  (3 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00900 [list] [network] Terpenoid backbone biosynthesis (60 genes)
Protein NP_001077840.1  NP_177972.2 
BLAST NP_001077840.1  NP_177972.2 
Orthologous [Ortholog page] SPS2 (ath)  LOC4351957 (osa)  LOC7459128 (ppo)  LOC25487134 (mtr)  LOC100191875 (zma)  LOC100246988 (vvi)  LOC100282721 (zma)  LOC100783538 (gma)  LOC100805842 (gma)  SppS (sly)  LOC103832329 (bra)  LOC103872491 (bra) 
Subcellular
localization
wolf
chlo 5,  mito 4  (predict for NP_001077840.1)
chlo 9  (predict for NP_177972.2)
Subcellular
localization
TargetP
mito 6  (predict for NP_001077840.1)
chlo 2  (predict for NP_177972.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
ath00053 Ascorbate and aldarate metabolism 2
Genes directly connected with SPS1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.9 SPS2 solanesyl diphosphate synthase 2 [detail] 838275
10.2 AT3G56290 potassium transporter [detail] 824796
9.8 AT1G64500 Glutaredoxin family protein [detail] 842758
8.7 AT1G66330 senescence-associated family protein [detail] 842950
8.3 VTC2 GDP-L-galactose phosphorylase 1 [detail] 828792
8.2 AT5G42760 Leucine carboxyl methyltransferase [detail] 834285
6.7 SEP2 stress enhanced protein 2 [detail] 816733
6.0 GME GDP-D-mannose 3',5'-epimerase [detail] 833002
Coexpressed
gene list		 [Coexpressed gene list for SPS1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263122_at
263122_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263122_at
263122_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263122_at
263122_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844187      
Refseq ID (protein) NP_001077840.1 
NP_177972.2 


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