| functional annotation |
| Function |
Mitochondrial transcription termination factor family protein |
|
| GO BP |
|
GO:0006355 [list] [network] regulation of transcription, DNA-templated
|
(1984 genes)
|
IEA
|
 |
|
| GO CC |
|
| GO MF |
|
GO:0003690 [list] [network] double-stranded DNA binding
|
(343 genes)
|
IEA
|
|
|
| KEGG |
|
|
| Protein |
NP_178014.2
|
| BLAST |
NP_178014.2
|
| Orthologous |
[Ortholog page]
LOC25495073 (mtr)
LOC100244378 (vvi)
LOC100383444 (zma)
LOC100802127 (gma)
LOC101262193 (sly)
LOC102667327 (gma)
LOC103644366 (zma)
LOC103832370 (bra)
LOC107276037 (osa)
|
Subcellular
localization
wolf |
|
nucl 4,
cyto 4,
chlo 2,
cysk_nucl 2,
nucl_plas 2
|
(predict for NP_178014.2)
|
|
Subcellular
localization
TargetP |
|
chlo 8
|
(predict for NP_178014.2)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
Genes directly connected with AT1G78930 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 11.4 |
ECB2 |
Tetratricopeptide repeat (TPR)-like superfamily protein |
[detail] |
838121 |
| 9.9 |
AT5G62370 |
Tetratricopeptide repeat (TPR)-like superfamily protein |
[detail] |
836358 |
| 9.8 |
AT1G48570 |
zinc finger (Ran-binding) family protein |
[detail] |
841278 |
| 9.3 |
POLGAMMA1 |
polymerase gamma 1 |
[detail] |
821600 |
| 9.2 |
AT3G06920 |
Tetratricopeptide repeat (TPR)-like superfamily protein |
[detail] |
819877 |
| 8.8 |
AT4G12750 |
Homeodomain-like transcriptional regulator |
[detail] |
826887 |
| 8.8 |
AT1G80150 |
Tetratricopeptide repeat (TPR)-like superfamily protein |
[detail] |
844355 |
| 8.7 |
AT1G65080 |
Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein |
[detail] |
842816 |
| 8.5 |
AT1G08610 |
Pentatricopeptide repeat (PPR) superfamily protein |
[detail] |
837383 |
| 8.5 |
AT1G80245 |
Spc97 / Spc98 family of spindle pole body (SBP) component |
[detail] |
844365 |
| 8.0 |
AT4G38150 |
Pentatricopeptide repeat (PPR) superfamily protein |
[detail] |
829971 |
| 7.6 |
RPD1 |
Ubiquitin carboxyl-terminal hydrolase family protein |
[detail] |
829487 |
| 6.9 |
AT5G58370 |
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
[detail] |
835949 |
| 6.6 |
Tic22-III |
Tic22-like family protein |
[detail] |
821952 |
| 6.5 |
AT5G64150 |
RNA methyltransferase family protein |
[detail] |
836536 |
| 6.5 |
PrfB3 |
peptide chain release factor |
[detail] |
824886 |
| 5.7 |
AT5G65490 |
suppressor-like protein |
[detail] |
836674 |
| 5.2 |
5PTase14 |
endonuclease/exonuclease/phosphatase family protein |
[detail] |
817740 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT1G78930]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
264142_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
264142_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
264142_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT1G78930 Gene
