[←][→] ath   At1g78930 Gene
functional annotation
Function   Mitochondrial transcription termination factor family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (789 genes)  IEA  
KEGG
Protein NP_178014.2 
BLAST NP_178014.2 
Orthologous [Ortholog page] LOC7465582 (ppo)  LOC25495073 (mtr)  LOC100802127 (gma)  LOC101262193 (sly)  LOC102667327 (gma)  LOC103832370 (bra)  LOC107276037 (osa)  LOC123104819 (tae)  LOC123113104 (tae)  LOC123122629 (tae)  LOC123397104 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  chlo 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_178014.2)
Subcellular
localization
TargetP
chlo 8  (predict for NP_178014.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 2
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03440 Homologous recombination 2
Genes directly connected with AT1G78930 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.1 ECB2 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 838121
10.2 SCA3 DNA/RNA polymerases superfamily protein [detail] 816946
9.7 AT1G08610 Pentatricopeptide repeat (PPR) superfamily protein [detail] 837383
9.3 POLGAMMA1 polymerase gamma 1 [detail] 821600
8.8 AT1G65080 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain-containing protein [detail] 842816
8.5 AT1G48460 tRNA-processing ribonuclease BN [detail] 841267
7.8 AT1G80245 Spc97 / Spc98 family of spindle pole body (SBP) component [detail] 844365
7.5 SDG40 SET domain group 40 [detail] 831588
6.8 AT1G62350 Pentatricopeptide repeat (PPR) superfamily protein [detail] 842533
6.6 AT1G62010 Mitochondrial transcription termination factor family protein [detail] 842496
6.0 AT5G53080 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 835388
5.5 AT2G02880 mucin-like protein [detail] 814819
Coexpressed
gene list		 [Coexpressed gene list for AT1G78930]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264142_at
264142_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264142_at
264142_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264142_at
264142_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844232      
Refseq ID (protein) NP_178014.2 


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