[←][→] ath   At1g79040 Gene
functional annotation
Function   photosystem II subunit R    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010270 [list] [network] photosystem II oxygen evolving complex assembly  (3 genes)  IEP  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (19 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00195 [list] [network] Photosynthesis (77 genes)
Protein NP_178025.1 
BLAST NP_178025.1 
Orthologous [Ortholog page] LOC543448 (tae)  PSBR (sly)  LOC4342395 (osa)  LOC4344899 (osa)  LOC7454978 (ppo)  LOC7470970 (ppo)  LOC11446770 (mtr)  LOC18095761 (ppo)  LOC18095762 (ppo)  LOC100305752 (gma)  LOC100499745 (gma)  LOC101252753 (sly)  LOC103830498 (bra)  LOC103832382 (bra)  LOC103853163 (bra)  LOC107276047 (osa)  LOC123052872 (tae)  LOC123128767 (tae)  LOC123128885 (tae)  LOC123139111 (tae)  LOC123139414 (tae)  LOC123146030 (tae)  LOC123402786 (hvu)  LOC123426277 (hvu)  LOC123426278 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_178025.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_178025.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath00196 Photosynthesis - antenna proteins 3
Genes directly connected with PSBR on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.8 PSAK photosystem I subunit K [detail] 839918
16.6 PSBO1 PS II oxygen-evolving complex 1 [detail] 836789
15.7 DRT112 Cupredoxin superfamily protein [detail] 838622
10.5 CP12-1 CP12 domain-containing protein 1 [detail] 819353
Coexpressed
gene list		 [Coexpressed gene list for PSBR]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264092_at
264092_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264092_at
264092_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264092_at
264092_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844245      
Refseq ID (protein) NP_178025.1 


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