[←][→] ath   AT1G79650 Gene
functional annotation
Function   Rad23 UV excision repair protein family  
GO BP
GO:0006289 [list] [network] nucleotide-excision repair  (46 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0070628 [list] [network] proteasome binding  (16 genes)  IDA  
GO:0031593 [list] [network] polyubiquitin modification-dependent protein binding  (23 genes)  IDA  
GO:0003684 [list] [network] damaged DNA binding  (40 genes)  IEA  
GO:0043130 [list] [network] ubiquitin binding  (51 genes)  IDA  
KEGG ath03420 [list] [network] Nucleotide excision repair (69 genes)
ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_001185439.1  NP_565216.2  NP_850982.1  NP_974181.1 
BLAST NP_001185439.1  NP_565216.2  NP_850982.1  NP_974181.1 
Orthologous [Ortholog page] RAD23A (ath)  LOC4328500 (osa)  LOC7462834 (ppo)  LOC7476798 (ppo)  LOC25488002 (mtr)  LOC100267246 (vvi)  LOC100282427 (zma)  LOC100778187 (gma)  LOC100804038 (gma)  LOC100819019 (gma)  LOC101251966 (sly)  LOC103830472 (bra)  LOC103842858 (bra)  LOC103872412 (bra) 
Subcellular
localization
wolf
chlo 4,  E.R. 2,  mito 1,  E.R._vacu 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_001185439.1)
chlo 7,  mito 1,  nucl_plas 1  (predict for NP_565216.2)
chlo 7,  mito 1,  nucl_plas 1  (predict for NP_850982.1)
chlo 7,  mito 2  (predict for NP_974181.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001185439.1)
other 9  (predict for NP_565216.2)
other 9  (predict for NP_850982.1)
other 9  (predict for NP_974181.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 3
ath03015 mRNA surveillance pathway 2
ath04141 Protein processing in endoplasmic reticulum 2
ath03050 Proteasome 2
Genes directly connected with RAD23B on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 RCN1 ARM repeat superfamily protein [detail] 839135
5.5 SCAMP3 Secretory carrier membrane protein (SCAMP) family protein [detail] 816617
5.3 RAE1 Transducin/WD40 repeat-like superfamily protein [detail] 844406
5.3 RBP47B RNA-binding protein 47B [detail] 821447
Coexpressed
gene list		 [Coexpressed gene list for RAD23B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261352_at
261352_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261352_at
261352_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261352_at
261352_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844304      
Refseq ID (protein) NP_001185439.1 
NP_565216.2 
NP_850982.1 
NP_974181.1 


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