[][] ath   AT1G80170 Gene
functional annotation
Function   Pectin lyase-like superfamily protein
GO BP
GO:0071555 [list] [network] cell wall organization  (538 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0005618 [list] [network] cell wall  (685 genes)  IEA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (52 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001320668.1  NP_565232.1 
BLAST NP_001320668.1  NP_565232.1 
Orthologous [Ortholog page] XOPG1 (sly)LOC4339483 (osa)LOC7478117 (ppo)LOC11431320 (mtr)LOC11433078 (mtr)LOC100263423 (vvi)LOC100285523 (zma)LOC100819195 (gma)LOC101264436 (sly)LOC103830423 (bra)
Subcellular
localization
wolf
chlo 7,  extr 3  (predict for NP_001320668.1)
chlo 6,  extr 3,  chlo_mito 3  (predict for NP_565232.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_001320668.1)
scret 8  (predict for NP_565232.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G80170 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.3 AT4G28070 AFG1-like ATPase family protein [detail] 828922
4.5 MYB23 myb domain protein 23 [detail] 834031
4.5 AT3G50050 Eukaryotic aspartyl protease family protein [detail] 824167
2.9 AT1G62333 hypothetical protein [detail] 6240573
Coexpressed
gene list
[Coexpressed gene list for AT1G80170]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262060_at
262060_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262060_at
262060_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
262060_at
262060_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 844357    
Refseq ID (protein) NP_001320668.1 
NP_565232.1 


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