[←][→] ath   AT1G80420 Gene
functional annotation
Function   BRCT domain-containing DNA repair protein  
GO BP
GO:1901969 [list] [network] positive regulation of polynucleotide 3'-phosphatase activity  (1 genes)  IDA  
GO:1901972 [list] [network] positive regulation of DNA-5-methylcytosine glycosylase activity  (1 genes)  IDA  
GO:0006266 [list] [network] DNA ligation  (7 genes)  IMP  
GO:0080111 [list] [network] DNA demethylation  (12 genes)  IMP  
GO:0006303 [list] [network] double-strand break repair via nonhomologous end joining  (16 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0010385 [list] [network] double-stranded methylated DNA binding  (8 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03410 [list] [network] Base excision repair (43 genes)
Protein NP_001077856.1  NP_001185449.1  NP_001321272.1  NP_178158.2  NP_850985.1 
BLAST NP_001077856.1  NP_001185449.1  NP_001321272.1  NP_178158.2  NP_850985.1 
Orthologous [Ortholog page] LOC4340098 (osa)  LOC7490987 (ppo)  LOC11442049 (mtr)  LOC100266851 (vvi)  LOC100283527 (zma)  LOC100780160 (gma)  LOC100818448 (gma)  LOC101246064 (sly)  LOC103853256 (bra) 
Subcellular
localization
wolf
nucl 8,  cyto 1,  cysk 1,  golg_plas 1  (predict for NP_001077856.1)
nucl 8,  cyto 1,  cysk 1,  golg_plas 1  (predict for NP_001185449.1)
nucl 8,  cyto 1,  cysk 1,  golg_plas 1  (predict for NP_001321272.1)
nucl 8,  cyto 1,  cysk 1,  golg_plas 1  (predict for NP_178158.2)
nucl 8,  cyto 1,  cysk 1,  golg_plas 1  (predict for NP_850985.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001077856.1)
chlo 6  (predict for NP_001185449.1)
chlo 6  (predict for NP_001321272.1)
chlo 6  (predict for NP_178158.2)
chlo 6  (predict for NP_850985.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with ATXRCC1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.1 AT2G17975 zinc finger (Ran-binding) family protein [detail] 816309
5.0 AtCaN2 Ca(2+)-dependent nuclease family protein [detail] 818634
4.5 AT2G43370 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 818938
Coexpressed
gene list		 [Coexpressed gene list for ATXRCC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260279_at
260279_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260279_at
260279_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260279_at
260279_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844382      
Refseq ID (protein) NP_001077856.1 
NP_001185449.1 
NP_001321272.1 
NP_178158.2 
NP_850985.1 


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