ATTED-II : GeneID search result

[←][→] ath At2g01150 Gene

functional annotation

Function

RING-H2 finger protein 2B

GO BP

GO:0047484 [list] [network] regulation of response to osmotic stress	(47 genes)	IMP
GO:0009789 [list] [network] positive regulation of abscisic acid-activated signaling pathway	(53 genes)	IMP
GO:0071456 [list] [network] cellular response to hypoxia	(241 genes)	HEP
GO:0016567 [list] [network] protein ubiquitination	(434 genes)	IDA

GO CC

GO:0005739 [list] [network] mitochondrion	(4228 genes)	ISM
GO:0005634 [list] [network] nucleus	(10305 genes)	IDA ISM
GO:0005737 [list] [network] cytoplasm	(13880 genes)	IDA

GO MF

GO:0061630 [list] [network] ubiquitin protein ligase activity	(78 genes)	IDA
GO:0004842 [list] [network] ubiquitin-protein transferase activity	(261 genes)	TAS
GO:0000976 [list] [network] transcription cis-regulatory region binding	(708 genes)	IPI
GO:0005515 [list] [network] protein binding	(5066 genes)	IPI

KEGG

Protein

NP_001318169.1 NP_001324450.1 NP_565253.2

BLAST

NP_001318169.1 NP_001324450.1 NP_565253.2

Orthologous

[Ortholog page] RHA2A (ath) LOC7475555 (ppo) LOC7482861 (ppo) LOC25485456 (mtr) LOC100797628 (gma) LOC100803789 (gma) LOC101266940 (sly) LOC103827603 (bra) LOC103832774 (bra) LOC103839504 (bra) LOC103842919 (bra) LOC103872299 (bra)

Subcellular
localization
wolf

nucl 4, cyto 4, cyto_nucl 4	(predict for NP_001318169.1)
chlo 6, nucl 3	(predict for NP_001324450.1)
mito 6, cyto_mito 4, nucl 2, chlo 1	(predict for NP_565253.2)

Subcellular
localization
TargetP

other 3	(predict for NP_001318169.1)
other 3, mito 3	(predict for NP_001324450.1)
other 5, mito 4	(predict for NP_565253.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with RHA2B on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
5.0	HB6	homeobox protein 6	[detail]	816775
5.0	HB16	homeobox protein 16	[detail]	830169
4.6	BHLH32	basic helix-loop-helix 32	[detail]	822159
3.6	AT1G71110	uncharacterized protein	[detail]	843451

Coexpressed
gene list

[Coexpressed gene list for RHA2B]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

265740_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

265740_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

265740_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	814644
Refseq ID (protein)	NP_001318169.1
	NP_001324450.1
	NP_565253.2

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