[←][→] ath   At2g03870 Gene
functional annotation
Function   Small nuclear ribonucleoprotein family protein      
GO BP
GO:0006396 [list] [network] RNA processing  (567 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03018 [list] [network] RNA degradation (113 genes)
ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_178480.1  NP_849931.1 
BLAST NP_178480.1  NP_849931.1 
Orthologous [Ortholog page] LOC4344803 (osa)  LOC7480092 (ppo)  LOC7481998 (ppo)  LOC11407370 (mtr)  LOC25501029 (mtr)  LOC100306498 (gma)  LOC100789536 (gma)  LOC100807381 (gma)  LOC101258986 (sly)  LOC103853921 (bra)  LOC103875380 (bra)  LOC123047226 (tae)  LOC123055025 (tae)  LOC123190880 (tae)  LOC123428240 (hvu) 
Subcellular
localization
wolf
chlo 3,  nucl 1,  cyto 1,  mito 1,  extr 1,  cysk_nucl 1  (predict for NP_178480.1)
chlo 3,  nucl 1,  cyto 1,  mito 1,  extr 1,  cysk_nucl 1  (predict for NP_849931.1)
Subcellular
localization
TargetP
other 8  (predict for NP_178480.1)
other 8  (predict for NP_849931.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03018 RNA degradation 4
Genes directly connected with EMB2816 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.4 EMB2786 COMPLEX 1 LYR-like protein [detail] 820993
8.0 LSM2 Small nuclear ribonucleoprotein family protein [detail] 839526
7.6 AT4G32930 uncharacterized protein [detail] 829430
7.2 AT2G27330 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 817276
6.6 ER enhancer of rudimentary protein [detail] 830948
6.3 AT1G09150 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein [detail] 837434
5.8 AT5G58005 Cytochrome c oxidase, subunit Vib family protein [detail] 835912
5.6 KIWI ssDNA-binding transcriptional regulator [detail] 830784
5.3 AT4G15790 uveal autoantigen with coiled-coil/ankyrin [detail] 827259
Coexpressed
gene list		 [Coexpressed gene list for EMB2816]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263332_at
263332_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263332_at
263332_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263332_at
263332_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 814913      
Refseq ID (protein) NP_178480.1 
NP_849931.1 


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