[←][→] ath   At2g04270 Gene
functional annotation
Function   RNAse E/G-like protein      
GO BP
GO:0010239 [list] [network] chloroplast mRNA processing  (10 genes)  IMP  
GO:1901259 [list] [network] chloroplast rRNA processing  (15 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO:0006396 [list] [network] RNA processing  (567 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA IMP  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0004521 [list] [network] endoribonuclease activity  (82 genes)  IDA  
KEGG
Protein NP_001189510.1  NP_001318196.1  NP_001325370.1  NP_001325371.1  NP_001325372.1  NP_178508.2  NP_850987.1  NP_850988.1  NP_850989.1 
BLAST NP_001189510.1  NP_001318196.1  NP_001325370.1  NP_001325371.1  NP_001325372.1  NP_178508.2  NP_850987.1  NP_850988.1  NP_850989.1 
Orthologous [Ortholog page] LOC4345271 (osa)  LOC7469343 (ppo)  LOC11409378 (mtr)  LOC100136876 (sly)  LOC100795436 (gma)  LOC100809907 (gma)  LOC103828537 (bra)  LOC123154389 (tae)  LOC123160510 (tae)  LOC123165327 (tae)  LOC123413152 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001189510.1)
nucl 5,  cyto 2,  chlo 1,  cyto_plas 1  (predict for NP_001318196.1)
nucl 5,  cyto 2,  chlo 1,  cyto_plas 1  (predict for NP_001325370.1)
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001325371.1)
nucl 5,  chlo 2,  cyto 1,  cysk 1,  chlo_mito 1,  cysk_plas 1  (predict for NP_001325372.1)
nucl 5,  cyto 2,  chlo 1,  cyto_plas 1  (predict for NP_178508.2)
nucl 7,  cyto 2  (predict for NP_850987.1)
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_850988.1)
cyto 3,  nucl 2,  vacu 2,  golg 1,  nucl_plas 1,  E.R._vacu 1,  cyto_pero 1  (predict for NP_850989.1)
Subcellular
localization
TargetP
chlo 4,  mito 3  (predict for NP_001189510.1)
other 8  (predict for NP_001318196.1)
other 8  (predict for NP_001325370.1)
mito 7  (predict for NP_001325371.1)
other 7  (predict for NP_001325372.1)
other 8  (predict for NP_178508.2)
chlo 6,  mito 3  (predict for NP_850987.1)
mito 7  (predict for NP_850988.1)
other 8  (predict for NP_850989.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RNEE/G on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.1 RIF10 polyribonucleotide nucleotidyltransferase [detail] 821181
8.0 PDE327 FAD/NAD(P)-binding oxidoreductase family protein [detail] 829195
7.3 emb1417 Pentatricopeptide repeat (PPR) superfamily protein [detail] 827867
5.6 AT5G61040 uncharacterized protein [detail] 836225
5.5 AT1G19720 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 838561
Coexpressed
gene list		 [Coexpressed gene list for RNEE/G]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263322_at
263322_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263322_at
263322_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263322_at
263322_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 814965      
Refseq ID (protein) NP_001189510.1 
NP_001318196.1 
NP_001325370.1 
NP_001325371.1 
NP_001325372.1 
NP_178508.2 
NP_850987.1 
NP_850988.1 
NP_850989.1 


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