[][] ath   AT2G04270 Gene
functional annotation
Function   RNAse E/G-like protein
GO BP
GO:0010239 [list] [network] chloroplast mRNA processing  (8 genes)  IMP  
GO:1901259 [list] [network] chloroplast rRNA processing  (15 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (194 genes)  IMP  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IBA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA IMP  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0004521 [list] [network] endoribonuclease activity  (85 genes)  IDA  
KEGG
Protein NP_001189510.1  NP_001318196.1  NP_001325370.1  NP_001325371.1  NP_001325372.1  NP_178508.2  NP_850987.1  NP_850988.1  NP_850989.1 
BLAST NP_001189510.1  NP_001318196.1  NP_001325370.1  NP_001325371.1  NP_001325372.1  NP_178508.2  NP_850987.1  NP_850988.1  NP_850989.1 
Orthologous [Ortholog page] LOC4345271 (osa)LOC7469343 (ppo)LOC11409378 (mtr)LOC100136876 (sly)LOC100256290 (vvi)LOC100795436 (gma)LOC100809907 (gma)LOC103643177 (zma)LOC103828537 (bra)
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001189510.1)
nucl 5,  cyto 2,  chlo 1,  cyto_plas 1  (predict for NP_001318196.1)
nucl 5,  cyto 2,  chlo 1,  cyto_plas 1  (predict for NP_001325370.1)
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001325371.1)
nucl 5,  chlo 2,  cyto 1,  cysk 1,  chlo_mito 1,  cysk_plas 1  (predict for NP_001325372.1)
nucl 5,  cyto 2,  chlo 1,  cyto_plas 1  (predict for NP_178508.2)
nucl 7,  cyto 2  (predict for NP_850987.1)
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_850988.1)
cyto 3,  nucl 2,  vacu 2,  golg 1,  nucl_plas 1,  E.R._vacu 1,  cyto_pero 1  (predict for NP_850989.1)
Subcellular
localization
TargetP
chlo 4,  mito 3  (predict for NP_001189510.1)
other 8  (predict for NP_001318196.1)
other 8  (predict for NP_001325370.1)
mito 7  (predict for NP_001325371.1)
other 7  (predict for NP_001325372.1)
other 8  (predict for NP_178508.2)
chlo 6,  mito 3  (predict for NP_850987.1)
mito 7  (predict for NP_850988.1)
other 8  (predict for NP_850989.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RNEE/G on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.9 emb1417 Pentatricopeptide repeat (PPR) superfamily protein [detail] 827867
7.6 PDE327 FAD/NAD(P)-binding oxidoreductase family protein [detail] 829195
7.5 RIF10 polyribonucleotide nucleotidyltransferase [detail] 821181
6.1 AT5G61040 hypothetical protein [detail] 836225
Coexpressed
gene list
[Coexpressed gene list for RNEE/G]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263322_at
263322_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263322_at
263322_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
263322_at
263322_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 814965    
Refseq ID (protein) NP_001189510.1 
NP_001318196.1 
NP_001325370.1 
NP_001325371.1 
NP_001325372.1 
NP_178508.2 
NP_850987.1 
NP_850988.1 
NP_850989.1 


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