[][] ath   AT2G04350 Gene
functional annotation
Function   AMP-dependent synthetase and ligase family protein
GO BP
GO:0006631 [list] [network] fatty acid metabolic process  (238 genes)  TAS  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA ISM  
GO MF
GO:0102391 [list] [network] decanoate-CoA ligase activity  (9 genes)  IEA  
GO:0003996 [list] [network] acyl-CoA ligase activity  (10 genes)  IEA  
GO:0004467 [list] [network] long-chain fatty acid-CoA ligase activity  (10 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath00061 [list] [network] Fatty acid biosynthesis (43 genes)
ath00071 [list] [network] Fatty acid degradation (47 genes)
ath01212 [list] [network] Fatty acid metabolism (69 genes)
ath04146 [list] [network] Peroxisome (87 genes)
Protein NP_178516.1  NP_849934.1 
BLAST NP_178516.1  NP_849934.1 
Orthologous [Ortholog page] LOC4338395 (osa)LOC7469339 (ppo)LOC11436555 (mtr)LOC100252885 (vvi)LOC100285568 (zma)LOC100304373 (zma)LOC100802266 (gma)LOC100803126 (gma)LOC101246995 (sly)LOC101264646 (sly)LOC103860297 (bra)
Subcellular
localization
wolf
chlo 3,  plas 2,  E.R. 2,  E.R._plas 2  (predict for NP_178516.1)
chlo 3,  plas 2,  E.R. 2,  E.R._plas 2  (predict for NP_849934.1)
Subcellular
localization
TargetP
other 8  (predict for NP_178516.1)
other 8  (predict for NP_849934.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath04075 Plant hormone signal transduction 2
ath00480 Glutathione metabolism 2
Genes directly connected with LACS8 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.8 AT5G10730 NAD(P)-binding Rossmann-fold superfamily protein [detail] 830939
6.1 GR1 glutathione-disulfide reductase [detail] 822003
5.6 AT5G57610 kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein [detail] 835865
4.9 TMT2 tonoplast monosaccharide transporter2 [detail] 829684
4.6 SPDS3 spermidine synthase 3 [detail] 835392
4.6 EULS3 hydroxyproline-rich glycoprotein family protein [detail] 818491
Coexpressed
gene list
[Coexpressed gene list for LACS8]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263811_at
263811_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263811_at
263811_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
263811_at
263811_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 814974    
Refseq ID (protein) NP_178516.1 
NP_849934.1 


The preparation time of this page was 0.2 [sec].