[←][→] ath   AT2G05160 Gene
functional annotation
Function   CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004518 [list] [network] nuclease activity  (252 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001324108.1  NP_001324109.1  NP_178588.1 
BLAST NP_001324108.1  NP_001324109.1  NP_178588.1 
Orthologous [Ortholog page] AT3G52980 (ath)  LOC4344566 (osa)  LOC7456000 (ppo)  LOC7458259 (ppo)  LOC11419540 (mtr)  LOC11442304 (mtr)  LOC100243592 (vvi)  LOC100247644 (vvi)  LOC100272340 (zma)  LOC100780955 (gma)  LOC100806206 (gma)  LOC100810174 (gma)  LOC100818984 (gma)  LOC101252701 (sly)  LOC101253006 (sly)  LOC103828518 (bra)  LOC103860330 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 2,  nucl_plas 2,  pero 1  (predict for NP_001324108.1)
nucl 6,  cysk 1,  chlo 1,  cyto 1,  vacu 1,  cysk_plas 1  (predict for NP_001324109.1)
nucl 6,  cysk 1,  chlo 1,  cyto 1,  vacu 1,  cysk_plas 1  (predict for NP_178588.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001324108.1)
other 8  (predict for NP_001324109.1)
other 8  (predict for NP_178588.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
Genes directly connected with AT2G05160 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.3 AT5G21222 protein kinase family protein [detail] 832244
5.1 G6PD1 glucose-6-phosphate dehydrogenase 1 [detail] 833559
5.0 AAE14 acyl-activating enzyme 14 [detail] 839932
4.5 TBL6 TRICHOME BIREFRINGENCE-LIKE 6 [detail] 825412
3.9 ROPGEF11 rop guanine nucleotide exchange factor-like protein [detail] 841654
Coexpressed
gene list		 [Coexpressed gene list for AT2G05160]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263106_at
263106_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263106_at
263106_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263106_at
263106_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 815064      
Refseq ID (protein) NP_001324108.1 
NP_001324109.1 
NP_178588.1 


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