[←][→] ath   AT2G15620 Gene
functional annotation
Function   nitrite reductase 1  
GO BP
GO:0010167 [list] [network] response to nitrate  (37 genes)  IEP  
GO:0042128 [list] [network] nitrate assimilation  (41 genes)  IEA  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA ISS  
GO CC
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO MF
GO:0048307 [list] [network] ferredoxin-nitrite reductase activity  (1 genes)  IEA  
GO:0050421 [list] [network] nitrite reductase (NO-forming) activity  (1 genes)  ISS  
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (81 genes)  IEA  
GO:0020037 [list] [network] heme binding  (328 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00910 [list] [network] Nitrogen metabolism (43 genes)
Protein NP_179164.1 
BLAST NP_179164.1 
Orthologous [Ortholog page] LOC542264 (zma)  NIR (gma)  nii1 (sly)  LOC778326 (sly)  LOC4326014 (osa)  LOC4330835 (osa)  LOC11445727 (mtr)  LOC100253671 (vvi)  LOC103627781 (zma)  LOC103844354 (bra)  LOC103848008 (bra) 
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 1  (predict for NP_179164.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_179164.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00910 Nitrogen metabolism 5
ath00030 Pentose phosphate pathway 2
ath00480 Glutathione metabolism 2
ath01200 Carbon metabolism 2
ath00340 Histidine metabolism 2
Genes directly connected with NIR1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
17.9 UPM1 urophorphyrin methylase 1 [detail] 834085
13.7 G6PD3 glucose-6-phosphate dehydrogenase 3 [detail] 839044
12.7 NIA1 nitrate reductase 1 [detail] 844112
11.9 MDAR6 monodehydroascorbate reductase 6 [detail] 842697
10.5 NIA2 nitrate reductase 2 [detail] 840630
10.1 AT1G68238 transmembrane protein [detail] 6241144
9.8 AT5G62720 Integral membrane HPP family protein [detail] 836393
9.3 RFNR2 root FNR 2 [detail] 839930
8.5 G6PD2 glucose-6-phosphate dehydrogenase 2 [detail] 831150
7.5 AT3G16560 Protein phosphatase 2C family protein [detail] 820905
7.5 AT4G09620 Mitochondrial transcription termination factor family protein [detail] 826547
7.5 GLT1 NADH-dependent glutamate synthase 1 [detail] 835427
7.3 EMB1075 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein [detail] 840958
7.1 AT5G26200 Mitochondrial substrate carrier family protein [detail] 832689
6.8 ATP-PRT1 ATP phosphoribosyl transferase 1 [detail] 842175
6.3 PMEAMT S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 841281
5.6 AT1G70780 hypothetical protein [detail] 843415
5.1 BCA4 beta carbonic anhydrase 4 [detail] 843377
5.1 AT3G54830 Transmembrane amino acid transporter family protein [detail] 824648
4.9 NRT1.1 nitrate transporter 1.1 [detail] 837763
Coexpressed
gene list		 [Coexpressed gene list for NIR1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265475_at
265475_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265475_at
265475_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265475_at
265475_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816055      
Refseq ID (protein) NP_179164.1 


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