[←][→] ath   AT2G16860 Gene
functional annotation
Function   GCIP-interacting family protein  
GO BP
GO CC
GO:0000974 [list] [network] Prp19 complex  (11 genes)  IBA  
GO:0071014 [list] [network] post-mRNA release spliceosomal complex  (12 genes)  IBA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (48 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001324839.1  NP_565396.1 
BLAST NP_001324839.1  NP_565396.1 
Orthologous [Ortholog page] LOC4342038 (osa)  LOC7470411 (ppo)  LOC25485617 (mtr)  LOC100252114 (vvi)  LOC100272811 (zma)  LOC100274600 (zma)  LOC100787714 (gma)  LOC100811651 (gma)  LOC101245103 (sly)  LOC103846014 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001324839.1)
nucl 9,  cyto_nucl 5  (predict for NP_565396.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001324839.1)
other 8  (predict for NP_565396.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT2G16860 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.0 AT2G27285 nuclear speckle splicing regulatory-like protein (DUF2040) [detail] 817271
11.5 AT1G17130 coiled-coil protein (DUF572) [detail] 838283
10.0 AT5G05210 Surfeit locus protein 6 [detail] 830403
9.6 AT3G52220 leukocyte immunoglobulin-like receptor family A protein [detail] 824387
8.8 AT2G20280 Zinc finger C-x8-C-x5-C-x3-H type family protein [detail] 816547
8.4 AT5G08420 RNA-binding KH domain-containing protein [detail] 830741
8.3 AT3G48710 DEK domain-containing chromatin associated protein [detail] 824032
8.3 FIP37 FKBP12 interacting protein 37 [detail] 824584
8.2 FUS12 proteasome family protein [detail] 817241
8.2 AT1G02330 integrator complex subunit-like protein [detail] 839367
8.1 AT3G59800 stress response protein [detail] 825149
7.9 AT3G62140 NEFA-interacting nuclear protein [detail] 825387
7.8 AT1G29850 double-stranded DNA-binding family protein [detail] 839863
7.6 AT3G19650 cyclin-like protein [detail] 821502
7.5 SMP2 Pre-mRNA splicing Prp18-interacting factor [detail] 829866
7.1 AT5G30490 craniofacial development-like protein [detail] 833136
7.0 ATJ6 J-domain protein 6 [detail] 830582
6.8 AT5G13970 midasin-like protein [detail] 831245
6.4 AT2G39170 MEF2BNB-like protein [detail] 818502
5.5 CCT1 phosphorylcholine cytidylyltransferase [detail] 817786
5.3 KELP transcriptional coactivator p15 (PC4) family protein (KELP) [detail] 826690
4.9 AT1G12530 hypothetical protein [detail] 837809
Coexpressed
gene list		 [Coexpressed gene list for AT2G16860]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266537_at
266537_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266537_at
266537_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266537_at
266537_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816187      
Refseq ID (protein) NP_001324839.1 
NP_565396.1 


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