[←][→] ath   AT2G18510 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO:0048026 [list] [network] positive regulation of mRNA splicing, via spliceosome  (4 genes)  IBA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  NAS  
GO CC
GO:0005689 [list] [network] U12-type spliceosomal complex  (18 genes)  IBA  
GO:0005681 [list] [network] spliceosomal complex  (142 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA IDA  
GO:1990904 [list] [network] ribonucleoprotein complex  (690 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_179441.1 
BLAST NP_179441.1 
Orthologous [Ortholog page] LOC4348798 (osa)  LOC7473156 (ppo)  LOC11419010 (mtr)  LOC100192006 (zma)  LOC100251324 (vvi)  LOC100501457 (zma)  LOC100791039 (gma)  LOC100792707 (gma)  LOC101244943 (sly)  LOC103828385 (bra)  LOC103837863 (bra) 
Subcellular
localization
wolf
nucl 6,  extr 1,  E.R. 1  (predict for NP_179441.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_179441.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath04141 Protein processing in endoplasmic reticulum 4
Genes directly connected with emb2444 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.1 MAC5A CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein [detail] 837248
7.3 PUX5 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma [detail] 827210
7.2 FUS5 Proteasome component (PCI) domain protein [detail] 839241
5.4 RAD23A Rad23 UV excision repair protein family [detail] 838188
5.2 AT1G14710 hydroxyproline-rich glycoprotein family protein [detail] 838036
Coexpressed
gene list		 [Coexpressed gene list for emb2444]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265930_at
265930_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265930_at
265930_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265930_at
265930_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816366      
Refseq ID (protein) NP_179441.1 


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