[←][→] ath   AT2G18740 Gene
functional annotation
Function   Small nuclear ribonucleoprotein family protein  
GO BP
GO:0043484 [list] [network] regulation of RNA splicing  (40 genes)  IMP  
GO:0048509 [list] [network] regulation of meristem development  (125 genes)  IMP  
GO:0008380 [list] [network] RNA splicing  (272 genes)  IMP  
GO CC
GO:0005681 [list] [network] spliceosomal complex  (142 genes)  IEA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001077914.1  NP_179464.1 
BLAST NP_001077914.1  NP_179464.1 
Orthologous [Ortholog page] AT4G30330 (ath)  LOC4328158 (osa)  LOC4344666 (osa)  LOC11406496 (mtr)  LOC11427208 (mtr)  LOC100257667 (vvi)  LOC100282045 (zma)  LOC100306304 (gma)  LOC100500256 (gma)  LOC100807929 (gma)  LOC100816107 (gma)  LOC101247333 (sly)  LOC101258239 (sly)  LOC103649582 (zma)  LOC103828371 (bra)  LOC103874062 (bra) 
Subcellular
localization
wolf
mito 4,  chlo 3,  cyto_nucl 3  (predict for NP_001077914.1)
mito 5,  cyto_nucl 3,  chlo 2  (predict for NP_179464.1)
Subcellular
localization
TargetP
mito 5,  scret 3  (predict for NP_001077914.1)
mito 5,  scret 3  (predict for NP_179464.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
ath03010 Ribosome 3
ath03018 RNA degradation 2
ath03020 RNA polymerase 2
Genes directly connected with AT2G18740 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.8 SNRNP-G Putative small nuclear ribonucleoprotein G [detail] 816925
9.0 SAD1 Small nuclear ribonucleoprotein family protein [detail] 834945
8.9 NRPB10 RNA polymerases N / 8 kDa subunit [detail] 837690
8.2 PFD6 prefoldin 6 [detail] 839878
8.0 HMGB5 high mobility group B5 [detail] 829709
8.0 AT2G34160 Alba DNA/RNA-binding protein [detail] 817977
7.8 LSM2 Small nuclear ribonucleoprotein family protein [detail] 839526
7.3 AT3G07590 Small nuclear ribonucleoprotein family protein [detail] 819950
7.0 AT4G30330 Small nuclear ribonucleoprotein family protein [detail] 829156
6.3 AT5G63150 hypothetical protein [detail] 836436
6.2 AT3G50550 hypothetical protein [detail] 824219
6.1 AT5G57860 Ubiquitin-like superfamily protein [detail] 835896
4.8 AT5G22280 peptidyl-prolyl cis-trans isomerase G [detail] 832288
Coexpressed
gene list		 [Coexpressed gene list for AT2G18740]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266074_at
266074_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266074_at
266074_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266074_at
266074_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816389      
Refseq ID (protein) NP_001077914.1 
NP_179464.1 


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